| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1915 |
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| Symbol | lasT |
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| ID | 7387220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1584721 |
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| End bp | 1585581 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651182 |
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| Product | tRNA/rRNA methyltransferase |
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| Protein accession | YP_002549379 |
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| Protein GI | 222148422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGCA CAAACAGCGA GCGCGAGCTT ATCGCCGAGG GACCGGCGAT TATTCTGGTG
GAACCGCAAT TGGGCGAGAA TATCGGCATG GTGGCCCGCG CCATGGCGAA TTTCGGGCTG
GCGGAGCTGC GTCTGGTCAA TCCGCGTGAC GGCTGGCCCT CGGAAAAAGC CCGGTCCGCC
GCATCCAAGG CCGATCATGT CATCGATGGT GCCAAGCTTT ACGATACGCT GGAAGAAGCA
CTGGCCGATC TGAATTTCGT CTACGCGACC ACGGCTCGCC AACGGGACAA TTTCAAGCCT
GTTGCCTCGC CGGTGACGGC GGCCTCAACT TTGCGAACCC GGTTTCTGGC TGGTGAAAAA
ACCGGAATTC TGTTCGGGCG GGAAAAATCC GGCCTGAAGA ATGAGGATGT GGCTCTGGCC
GATGAAATTG TCACCTTTCC GGTCAATCCT GCTTTTGCGT CGCTGAATAT CGCTCAGGCT
GTGCTGCTGA TGTCTTATGA GTGGATGAAA TCCACCATGG AAGATGTCAC CCAGACGCCG
TTTCAGGGCG TCGACCAATT GCCTGCCAGC AAGGAGGAAG TTATCGGCCT GTTCGAGCAT
ATGGAGGATG CACTTGATGC AAGGGGATAT TTCCGGCCGA TCCATAAAAA AGCACGAATG
ATCGACAATC TGCGCGCTGT GCTGACGCGA CGTGGTTTCA CTTCACCGGA AATCAATGTC
ATGCGTGGCG TGGTCTCGTC ACTCGACCGG TTCTCCCGCC GCAATCCGCG CGGCGCTGGA
GCGCCTTTGG AGGGCGACGC AGTGGACGGC ATTGAGAGGG ACGAAGCTGA TGGTAGCGGG
CATGAACGAG ATCAGGACTA A
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| Protein sequence | MAGTNSEREL IAEGPAIILV EPQLGENIGM VARAMANFGL AELRLVNPRD GWPSEKARSA
ASKADHVIDG AKLYDTLEEA LADLNFVYAT TARQRDNFKP VASPVTAAST LRTRFLAGEK
TGILFGREKS GLKNEDVALA DEIVTFPVNP AFASLNIAQA VLLMSYEWMK STMEDVTQTP
FQGVDQLPAS KEEVIGLFEH MEDALDARGY FRPIHKKARM IDNLRAVLTR RGFTSPEINV
MRGVVSSLDR FSRRNPRGAG APLEGDAVDG IERDEADGSG HERDQD
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