Gene Avi_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1829 
Symbol 
ID7386795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1526326 
End bp1526760 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content55% 
IMG OID643651119 
ProductNTP pyrophosphohydrolase MutT family 
Protein accessionYP_002549316 
Protein GI222148359 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.579415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGAC ATGTCATTGA AAAGGTCCTT GTCTATGCAG CCGACCGCGA CCGGCTCTTG 
GTTTTCGTTG AGCCGGATTT TCCGCATATT CTACCGCAGG TGCCTGGTGG TACCATTGAA 
CATGGGGAAA GCCCCAGCGC TGCAGTTTGT CGTGAATTCG AAGAGGAGAC GGGCTTTGCC 
TGTCCCTCGC CTCCCCGCTT TCTGACTTCT GTCTGTTATC GGAATGTTCG AGATGGAGTT 
TCCATCCACC ACAGGCGCCA CTTTTTTCAC CTGCCTTTGC TTCACACACT CTATCCGCAG 
AGCTGGATTC ACAGCGAAAC AACGCCCCAC GGCGGTGGTG CTCCAGTGCG GTTTTGCTTC 
TTCTGGTTAA CCCAAGATGA GGCAAGCCAG CGGCTAGGCT ATGAGCATGA CGCCGCCCTG 
CCCCTGCTTC TTTAG
 
Protein sequence
MTGHVIEKVL VYAADRDRLL VFVEPDFPHI LPQVPGGTIE HGESPSAAVC REFEEETGFA 
CPSPPRFLTS VCYRNVRDGV SIHHRRHFFH LPLLHTLYPQ SWIHSETTPH GGGAPVRFCF 
FWLTQDEASQ RLGYEHDAAL PLLL