| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1822 |
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| Symbol | rplJ |
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| ID | 7386791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1516426 |
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| End bp | 1516944 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651115 |
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| Product | 50S ribosomal protein L10 |
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| Protein accession | YP_002549312 |
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| Protein GI | 222148355 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0244] Ribosomal protein L10 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAGAG CGGAAAAACG CGAATTCGTC ACAGAACTGA ACGAAGTCTT CAAGGCTTCT
GGTTCGGTTG TTGTGGCCCA CTATGCTGGT GTCACGGTTG CGCAGATGAA CGACTTCCGT
TCAAAAATGC GCGCTGCTGG CGGCACCGTC AAAGTCGCGA AGAACCGTCT GGCCAAGATC
GCTCTTCAGG GCACGGAGTC GGAAGGGATG ACAGATCTCT TCAAGGGCCA GACGCTGATT
GCTTACAGCG TCGACCCGAT CACGGCTCCG AAAGTCGTCA TGGATTTTGC CAAGACCAAC
GACAAGCTCG TTGTTCTCGG TGGTTCCATG GGAACAACCA CGCTCTCCGT GGATGCAGTC
AAGTCGCTTG CGACCCTGCC TTCGCTGGAC GAGCTGCGTG CAAAGCTGGT CGGCATGATT
CAGACCCCGG CTACTCGCAT CGCAGGCGTT GTTCAAGCAC CGGCAGCTCA GCTTGCTCGC
GTGTTTGCGG CTTATGCCAA GAAGGACGAA GCCGCGTAA
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| Protein sequence | MERAEKREFV TELNEVFKAS GSVVVAHYAG VTVAQMNDFR SKMRAAGGTV KVAKNRLAKI
ALQGTESEGM TDLFKGQTLI AYSVDPITAP KVVMDFAKTN DKLVVLGGSM GTTTLSVDAV
KSLATLPSLD ELRAKLVGMI QTPATRIAGV VQAPAAQLAR VFAAYAKKDE AA
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