Gene Avi_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1804 
Symbol 
ID7386780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1506442 
End bp1507143 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID643651100 
Producthypothetical protein 
Protein accessionYP_002549301 
Protein GI222148344 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGATTCGCA CCTACGGATA CACGCCACCC GAAGAGGCTG ATGTGCTGGT CGTGCTGGGC 
GGCGATGGCT TCATGCTGCA AAACCTGCAT GACACGATGA ATTCTGGGCG GCTGATCTAT 
GGCATGAACA GGGGCAGCGT CGGCTTCCTG ATGAATGATT ACCGGGTGGA AGACCTGCCG 
GAGCGAATCG CCATCGCTAC CGAGAATGAT TTTCATCCCC TGAAAATGAC CGCACTCAGC 
GAAGACGGCA CGCAAACCGT CGCGCTTGCC ATCAACGAGG TGTCGTTGCT GCGGCAGTCC 
TATCAGGCGG CGAAACTGAG GGTACTGATC GACGGCCAGG AGCGCCTTGA TGAGCTGATC 
TGCGATGGGT TGATGGTGGC GACGCCGGTC GGCTCCACCG CCTATAATCT TTCCGCCCAT 
GGCCCGATTC TGCCGCTCGA TGCGCCTCTC CTGGCACTTA CCCCAGTCTG CCCGTTTCGG 
CCCCGGCGCT GGCGTGGCGC CTTGCTTCCC GACCGGGTCA CGGTGATGAT CGAGGTTTTG 
GAGGAGCGAA AGCGACCGGT GAATGCTGTC GCCGACAATA TCGAGGTCAA GTCGGTGCTC 
ACCGTGCAGA TCGAACAGGC CAAGGATATT ACCGCGCGGA TATTGTCAGA TCCCGATCAT 
TCCTGGTCGG AGCGAATCCT CGCCGAGCAA TTTGCCAATT AA
 
Protein sequence
MIRTYGYTPP EEADVLVVLG GDGFMLQNLH DTMNSGRLIY GMNRGSVGFL MNDYRVEDLP 
ERIAIATEND FHPLKMTALS EDGTQTVALA INEVSLLRQS YQAAKLRVLI DGQERLDELI 
CDGLMVATPV GSTAYNLSAH GPILPLDAPL LALTPVCPFR PRRWRGALLP DRVTVMIEVL 
EERKRPVNAV ADNIEVKSVL TVQIEQAKDI TARILSDPDH SWSERILAEQ FAN