| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1739 |
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| Symbol | proS |
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| ID | 7386731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1448895 |
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| End bp | 1450391 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651051 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002549252 |
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| Protein GI | 222148295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.350453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTGC ATGAGGCAGA TTGGGCCGCA GGGCCTTGTT ATCCTTCGCC GCCGTGCACA
AAAGGACGGG GCGGGTTTTC TTCCGTGTGC GAAACGGTTA GAAGGCTTCA AGAAAAACCA
GATATACGGC TGATTCCGCA CGAAATGCGG CTCGCCTCAC CAATGGAAGT CGGTATGCGT
CTCTCCCGTT ATTTTTTGCC TATCCTGAAG GAAAATCCCA AGGAAGCGGA AATCGTTTCT
CATCGGCTGA TGCTGCGCAC CGGCATGATC CGGCAGCAGT CACAAGGTAT CTATTCCTGG
CTGCCGCTGG GCAAGCGCGT GCTGGACAAG GTCAATGCGA TCATTCGTCA GGAGCAGAAC
CGGGCAGGGG CAGTGGAATT GCTGATGCCG ACGCTGCAAT CGGCGGAGCT TTGGCAGGAA
AGCGGTCGTT ACGACGACTA TGGCAAGGAA ATGCTGCGGA TCAAGGATCG GCAGGACCGG
CCCATGCTGT ACGGTCCCAC CAATGAAGAA ATGATCACGG ACATCTTCCG GTCCTATGTA
AAGTCCTACA AGAGCCTGCC GCTGAACCTC TATCACATAC AATTGAAATT CCGTGATGAG
ATCAGGCCGC GCTTCGGCAC GATGCGGTCG CGCGAGTTTT TGATGAAAGA CGCTTATTCC
TTCGATTTGA CGAAGGAAAG CGCCATTCAC TCCTATAACA AGATGTTTGC CGCCTATCTT
CGGACGTTTG ACCGGCTTGG TCTGCGCGCC ATTCCAATGC GCGCCGATAC CGGCCCGATT
GGTGGCAATC ACAGCCATGA ATTCATCATT CTCGCCGATA CCGGTGAATC GGAAGTCTTT
TGTCACAAGA GCTTCCTGGA TCGCGCCATT CCGTCTGCCG ATACCGATTT TGACGATGTT
GCTGGCCTTC AGGCGATTTT TGACGACTGG ACGTCGCACT ATGCCGCTAC CTCTGAAATG
CATGATGAGG CGGCTTACGG TGCCATGCCG GATGACGCGA AGATTTCCGC TCGTGGTATC
GAGGTCGGTC ATATCTTCTA TTTCGGCACC AAATATTCCG AACCGATGGG CGCCAAGGTG
CAGGGACCTG ATGGTAAGGA ACATCTTGTT CACATGGGAT CCTATGGTAT TGGGCCGACC
CGCCTTGTTC CGGCCATTAT CGAAGCTTCC CATGATGAAA ATGGCATTAT CTGGCCGGCT
TCCGTCGCGC CTTTCGATGC CATCATCATC AACATGAAGG CTGGGGATGC CGGTTGCGAT
GGCGCTTGCG ACACCGTGTA CGGGGCGCTG ACCAAGGCCG GCAAGGATGT TCTTCTCGAC
GATACCGATG ATCGCGCCGG TGCGAAATTC GCACTCGCCG ATTTGATCGG CGTTCCCTAT
CAGGTGATCG TCGGTCCGAG GTCGGTCGCC AATGGCGAAG TCGAGCTGAA GAACCGTAAA
ACCGGCGAGC GTGAAACCAT GACCATCGAG GCCGCCATCA ACCGTCTTGC CGGTTGA
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| Protein sequence | MSLHEADWAA GPCYPSPPCT KGRGGFSSVC ETVRRLQEKP DIRLIPHEMR LASPMEVGMR
LSRYFLPILK ENPKEAEIVS HRLMLRTGMI RQQSQGIYSW LPLGKRVLDK VNAIIRQEQN
RAGAVELLMP TLQSAELWQE SGRYDDYGKE MLRIKDRQDR PMLYGPTNEE MITDIFRSYV
KSYKSLPLNL YHIQLKFRDE IRPRFGTMRS REFLMKDAYS FDLTKESAIH SYNKMFAAYL
RTFDRLGLRA IPMRADTGPI GGNHSHEFII LADTGESEVF CHKSFLDRAI PSADTDFDDV
AGLQAIFDDW TSHYAATSEM HDEAAYGAMP DDAKISARGI EVGHIFYFGT KYSEPMGAKV
QGPDGKEHLV HMGSYGIGPT RLVPAIIEAS HDENGIIWPA SVAPFDAIII NMKAGDAGCD
GACDTVYGAL TKAGKDVLLD DTDDRAGAKF ALADLIGVPY QVIVGPRSVA NGEVELKNRK
TGERETMTIE AAINRLAG
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