Gene Avi_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1736 
Symbol 
ID7386729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1447432 
End bp1448025 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content59% 
IMG OID643651049 
Producttranscriptional regulator TetR family 
Protein accessionYP_002549250 
Protein GI222148293 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGT CCCGACGAGA AACCATGGAG GAAAACCGCA TCAAATTGAT TGCGGCAGGC 
CGAAAAGCCT TTGCTGAAAA GGGATATGCG GCGGCGTCCA TGGACGAGTT GACCGCTGCT 
GCGGGGCTGA CGCGCGGTGC GCTTTATCAT AACTTTGGCG ACAAGCGGGG TCTGCTGGCG 
GCGGTTGTCG ACCAGATCGA TTCGGAAATG GCCGCCCGTG CCCAGGAAAT CGGTTCTCAT 
GCTGCGACAG ACTGGCATCG CCTGCTGGCT GAGGGCGTGG CTTATATCGA AATGGCAATG 
GAGCCGGAGG TGCAGCGTAT CGTGTTGCTT GACGGCCCCG CAGTGTTGGG TGACCCCTCC 
AAATGGCCAA GCCAGAACAC TTGTCTTCAG ATAACCCGGC GGGCTTTGGA GAGCCTTATT 
GCTCAGGAGG TCCTAAAGCG GGTTGATGCG GAAGCCGCCG CACGGCTTCT GAGCGGGGCC 
GCCCTTGATG CGGCACTTTG GATTGCGGCC AGCGACGATC CGGAAAATGT CTTGCCAAAG 
GCGGTCGAGG CTTTCTGCGC CATGGCTGAA GGCCTGCTTT GCAATCCGCG TTGA
 
Protein sequence
MAKSRRETME ENRIKLIAAG RKAFAEKGYA AASMDELTAA AGLTRGALYH NFGDKRGLLA 
AVVDQIDSEM AARAQEIGSH AATDWHRLLA EGVAYIEMAM EPEVQRIVLL DGPAVLGDPS 
KWPSQNTCLQ ITRRALESLI AQEVLKRVDA EAAARLLSGA ALDAALWIAA SDDPENVLPK 
AVEAFCAMAE GLLCNPR