| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1718 |
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| Symbol | nuoF |
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| ID | 7386715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1431760 |
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| End bp | 1433064 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651035 |
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| Product | NADH dehydrogenase I subunit F |
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| Protein accession | YP_002549236 |
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| Protein GI | 222148279 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
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| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACAGG ATAAGGACCG CATTTTCACC AATATCTACG GCCTCAAGGA TAAGTCCCTG
AAAGGCGCGA TGAGCCGCGG CCATTGGGAT GGGACCAAGC AGATCCTGGA AAAGGGGCGC
GACTGGATCA TTAATGAAAT GAAGGCCTCC GGTCTTCGCG GTCGTGGCGG TGCAGGCTTT
CCAACTGGTC TGAAGTGGTC CTTCATGCCG AAGGAAAGCG ACGGTCGCCC GCATTATCTG
GTCGTGAATG CCGATGAGTC CGAACCCGGC ACCTGCAAAG ACCGGGAAAT CATGCGCCAT
GATCCGCATA CGCTGCTGGA AGGCTGTGTC ATCGCCGGTT TCGCCATGGG CGCCCACGCC
GCCTATATTT ATGTGCGCGG TGAATACATG CGCGAACGCG AAGCGCTTCA GGCTGCGATC
GACGAGTGTT ACGAATACGG ATTGCTGGGC AAAAACAACA AGCTCGGTTG GGATTATGAC
ATTTACGTTC ACCACGGCGC AGGGGCCTAT ATCTGCGGCG AGGAAACGGC TTTGCTCGAA
AGCCTTGAAG GCAAGAAGGG CCAGCCACGC CTGAAGCCGC CATTCCCGGC CAATATGGGT
CTCTATGGCT GCCCGACGAC GGTCAACAAT GTCGAATCGA TCGCGGTTGC GCCGACCATC
CTGCGTCGTG GCGCTGGCTG GTTCTCGTCC TTTGGCCGCC CGAACAATGT TGGCACCAAG
CTGTTCATGA TCTCCGGTCA TGTCAACAAG CCCTGCACGG TTGAAGAGAC CATGGGGATC
ACGTTCCGCG AACTGATCGA GCGGCATGCC GGCGGCATTC GCGGCGGTTG GGACAATCTT
CTGGCTGTCA TTCCCGGCGG TGCGTCCTGT CCGGTGGTCA AGGCGGAAGA TATTATTGAC
GTCCCCATGG ATTTCGATGG GCTGCGTGAT GTGAAATCCT CGTTCGGTAC CGCAGCGATT
ATCGTCATGG ATAAGTCCAC CGATATCATC AAGGCGATTG CCCGGCTGTC GCAGTTCTTC
AAGCATGAGA GCTGCGGCCA ATGCACGCCG TGCCGTGAAG GGACCGGCTG GATGTGGCGG
GTGATGGAAC GCATGGTGAA GGGCAATGCC CAGAAGCGCG AAATCGACAT GCTGTTCCAG
GTCACCAAGC AGATCGAAGG TCATACGATC TGCGCGCTTG GCGATGCGGC TGCTTGGCCG
ATCCAGGGTC TGATCCGTAA TTTCCGGCCT GAGATCGAGG CCAGGATTGA TGACTATACC
CGCAAGGCCA TGGACCATGG CGCGGTCATG GAAGCGGCTG AGTAA
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| Protein sequence | MLQDKDRIFT NIYGLKDKSL KGAMSRGHWD GTKQILEKGR DWIINEMKAS GLRGRGGAGF
PTGLKWSFMP KESDGRPHYL VVNADESEPG TCKDREIMRH DPHTLLEGCV IAGFAMGAHA
AYIYVRGEYM REREALQAAI DECYEYGLLG KNNKLGWDYD IYVHHGAGAY ICGEETALLE
SLEGKKGQPR LKPPFPANMG LYGCPTTVNN VESIAVAPTI LRRGAGWFSS FGRPNNVGTK
LFMISGHVNK PCTVEETMGI TFRELIERHA GGIRGGWDNL LAVIPGGASC PVVKAEDIID
VPMDFDGLRD VKSSFGTAAI IVMDKSTDII KAIARLSQFF KHESCGQCTP CREGTGWMWR
VMERMVKGNA QKREIDMLFQ VTKQIEGHTI CALGDAAAWP IQGLIRNFRP EIEARIDDYT
RKAMDHGAVM EAAE
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