Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1681 |
Symbol | rpsI |
ID | 7386689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1403453 |
End bp | 1403920 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651006 |
Product | 30S ribosomal protein S9 |
Protein accession | YP_002549210 |
Protein GI | 222148253 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00362695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACC TCTCTTCCCT GAAGGATCTC GGCACTGCGC AGGAAGCTTC GGCTCCCGTT CACGTCCGTA AGGTCGACGC TCAAGGCCGC GCTTACGCGA CTGGCAAGCG CAAGAACGCA ATTGCCCGCG TCTGGGTCAA GCCCGGCACT GGCAAGATCA CGGTCAATGG CCGCGATTTC CCGGTTTACT TCGCCCGTCC GGTTCTGCAG ATGATTCTGC AGCAGCCTGT CGTTGCTGCT GCTCGCACCG GTCAGTTCGA CGTTATCGCC ACCGTGACCG GTGGTGGTCT GTCCGGCCAG GCTGGCGCTG TGCGTCACGG CATTTCCAAG GCACTCACCT ACTTCGAACC GGGCCTGCGC TCGGTTCTGA AGAAGGGTGG CTTCCTGACC CGCGATAGCC GCGTTGTTGA ACGTAAGAAG TACGGCAAGG CAAAAGCTCG CCGGTCCTTC CAGTTCTCCA AGCGCTAA
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Protein sequence | MADLSSLKDL GTAQEASAPV HVRKVDAQGR AYATGKRKNA IARVWVKPGT GKITVNGRDF PVYFARPVLQ MILQQPVVAA ARTGQFDVIA TVTGGGLSGQ AGAVRHGISK ALTYFEPGLR SVLKKGGFLT RDSRVVERKK YGKAKARRSF QFSKR
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