| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1665 |
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| Symbol | gumB |
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| ID | 7386677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1391532 |
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| End bp | 1392101 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650994 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_002549198 |
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| Protein GI | 222148241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACCG CCAAACAGAT CTTGCTGGCT GTTGCCGTCA CCCTGCTGGC GGTGCTTTCC
AGCTGCGCCA CCTATAAGCC AGCTTCGAAA GTCTTCCAGG AAGCGACGAT CCAGCCCTAC
CGGCTGGATA GCGGCGACCG GTTGCGCATC ACCGTGTTCG ACCAGGCCAA TCTGAGCAAT
ACCTATACCG TAGACCAGGC CGGCTATATC GCCTTTCCGC TGATCGGTCA GGTCGCGGCG
CGCGGCACCA CCATGCCTCA GTTGGAAGGC ACCATTGCCC AGCGGCTGCG CAAGGGCTAT
CTGCGCGATC CCGACGTCAG CATCGAGATC GACCGCTACC GCTCGATCTT CGTCATGGGC
GAAGTCGGCC AACCGGGGCA ATATTCCTAT GTACCGGGCA TGACGGTGCA GAATGCCATC
GCGGTAGCTG GCGGGTTCAC CAGCCGCGCC AACGAGCGCG ACGTGGATGT CACCCGCAAG
GTGAACGGCA CCATCGCCAC GGGCCGAGTG CCGATCACCG ACCCGATCAT CGCCGGTGAC
ACGGTTTATG TGCGCGAACG GCTGTTCTGA
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| Protein sequence | MVTAKQILLA VAVTLLAVLS SCATYKPASK VFQEATIQPY RLDSGDRLRI TVFDQANLSN
TYTVDQAGYI AFPLIGQVAA RGTTMPQLEG TIAQRLRKGY LRDPDVSIEI DRYRSIFVMG
EVGQPGQYSY VPGMTVQNAI AVAGGFTSRA NERDVDVTRK VNGTIATGRV PITDPIIAGD
TVYVRERLF
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