| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1606 |
|---|
| Symbol | mucS |
|---|
| ID | 7387404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1348076 |
|---|
| End bp | 1348588 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643650953 |
|---|
| Product | exopolysaccharide II synthesis transcriptional activator ExpG |
|---|
| Protein accession | YP_002549158 |
|---|
| Protein GI | 222148201 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA CAAAGATCAA ACCGCAGGTG TCCGCTATCG ATCACGAAGA GCAGACCATC
CGTTCTCTCT ATCTTGATTC CCTGCATCTG GTGGAGCGCT TGCACCGCCG CCTGCTCGAC
GTCATCAAGG ACGAATTCGA CCGCCAGGGC CGCAACGACG TCAATGCTGT TCAGGCTTTG
CTGCTGTTTA ACATCGGCAA TTCCGAGCTG ACGGCCGGTG AATTGCGGTC TCGCGGCTAC
TACCTCGGCT CCAACGTTTC CTATAACGTC AAGAAGCTGG TCGACCTTGG TTTCATCAAT
CATTCCCGCT CGCGTGTCGA CCGTCGTTCG GTCCGTATTT CCCTGACACC GGAAGGCCAG
GACATCGCCG AAACCGTCGC CAAGCTCTAT GAGCGTCACG TCGGCTCCAT CCAGAAAGTC
GGCGGCATCG GTCCGGACGA ATTCAACCAG ATGAACAGGT TGTTGCAGCG TCTCGATCGC
TTCTGGAACG ACACGATCGC CTATCGCATG TAG
|
|---|
| Protein sequence | MTTTKIKPQV SAIDHEEQTI RSLYLDSLHL VERLHRRLLD VIKDEFDRQG RNDVNAVQAL
LLFNIGNSEL TAGELRSRGY YLGSNVSYNV KKLVDLGFIN HSRSRVDRRS VRISLTPEGQ
DIAETVAKLY ERHVGSIQKV GGIGPDEFNQ MNRLLQRLDR FWNDTIAYRM
|
|---|
| |