Gene Avi_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1589 
Symbol 
ID7387391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1329611 
End bp1331023 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content62% 
IMG OID643650940 
Productcu-oxidase multicopper oxidase protein 
Protein accessionYP_002549145 
Protein GI222148188 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTC TCTCCCGCCG CACCCTGTTG AAAGCCTCCG CTGTTGCCAC TGCCTATGGC 
GCGGGCCTCG GCATTGCCAG CCGCTTCCAG GGCGCACGCA TGGCCTTTGC CGCCCCCAAG
CCGTTGGAAA TCGAGGCACG GTTTACCTCA GTCACCCTCG ACGGCAGCCA TGAGACGAAA
AAGCTGATGA GCTTTGCTCT GCCGGGCCAG ACGGCGGCAA TGCCACCCAC CATCCGCATG
CGCCGGGGCG AGCCTTTCGC CGCAAAACTG ATAAACCATA TCGATGATGC CACCACCATT
CACTGGCATG GCTTGCGGAT TCCAAACGCC ATGGACGGCG TGCCCTTCCT GACCCAGCCC
TATGTCTATC AGGGCGACAG CTTCGATTAT GCCTTCACGC CGCCGGATGC CGGCACGTTC
TGGTATCACC CACATTGCAA CACGCTGACC CAGATGGCGA CCGGCATGAC CGGAATGATC
GTGGTAGAAG ACCCCGACGA CCCGGCCTTC GACGCGGAAA TCGATCTCAA TCTGCGCGAC
TGGCGGCTGG GCGAAGATGG CCAGTTCATC GCGCTATTCA AGCCGCGCGA CACGGCCCGG
GCCGGAACCT TCGGCACCGT GCGCACTGCC AATTGGCAGG TGGAGCCGCG CTACGATGCG
CCCAGCGGCG GCTTTACTCG GGTTCGGATC GTCAATACTG ACGTAACGCG GATCTATACG
CTGAAACTGG AAGGCGCAGA AGCGGTCATT GTCGCGCTGG ATGGCCAGCC GGTGCCAGCG
ATCCTGCCGA TGCAGCTTGC TATCGTCGCC CCCGGCCAGC GCATGGACAT CATCCTGAAA
ATGCCCGACA GCGAAGGCAG CGAGGCACGG CTGACCGATA TTCGCCCCAG CACGCCAAAA
ACCGTCGTCA GCTTCCGTGC CACCGGCGCG TCCTTGAAAC GCGATCTGAA GGACGTGCCG
CCGCTGCGGC CCAATCCCTT CGACAAGCCA GATCTCGCAT CCGCCCAGCA TATTCCGCTG
GTGCTCTCCG CCACGGCGGA AAACGGCGCG AAAGAGTCAA TCTGCGGCAC GCTCGGCTAT
TCCTTCTGGG CGATCAACAA GGTGACATGG CCGGGCGACA CACCCGACCC GACCGCGCCG
CTGGCTGAAT TGAAGCTGGG CAAGAGCTAC ATCTTCGACC TCGTCAACGA CACGCCTCAC
GCCCACCCAA TCCATCTGCA CGGCATGAAT TTCCAGGTGA TCGCCTCCAA CAACCGCCCT
GCGGTACCGC TGATCTCCGA CACCTACCTG GTCATGCCCG ATGAAAAGGT GCAACTCGCT
TTGGTGGCCG ACAATCCCGG CGACTGGGTT TTGCATTGCC ACATCATCGA GCACCAGAAG
ACCGGCATGA CCAGCTATGT CAGGGTCACA TGA
 
Protein sequence
MPILSRRTLL KASAVATAYG AGLGIASRFQ GARMAFAAPK PLEIEARFTS VTLDGSHETK 
KLMSFALPGQ TAAMPPTIRM RRGEPFAAKL INHIDDATTI HWHGLRIPNA MDGVPFLTQP
YVYQGDSFDY AFTPPDAGTF WYHPHCNTLT QMATGMTGMI VVEDPDDPAF DAEIDLNLRD
WRLGEDGQFI ALFKPRDTAR AGTFGTVRTA NWQVEPRYDA PSGGFTRVRI VNTDVTRIYT
LKLEGAEAVI VALDGQPVPA ILPMQLAIVA PGQRMDIILK MPDSEGSEAR LTDIRPSTPK
TVVSFRATGA SLKRDLKDVP PLRPNPFDKP DLASAQHIPL VLSATAENGA KESICGTLGY
SFWAINKVTW PGDTPDPTAP LAELKLGKSY IFDLVNDTPH AHPIHLHGMN FQVIASNNRP
AVPLISDTYL VMPDEKVQLA LVADNPGDWV LHCHIIEHQK TGMTSYVRVT