| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1515 |
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| Symbol | dnaB |
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| ID | 7386476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1268982 |
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| End bp | 1270478 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650884 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_002549089 |
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| Protein GI | 222148132 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.84588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATG TTGCGCGCAG GTTAAATCCT GCCCAGCCGG CAGAGCCCCA TTACCGGGAA
GCCCCGAACA ATATCGAGGC CGAACAGGCT TTGCTTGGCG CCATTCTGGT CAATAACGAT
GCCTATTATC GTGTCTCGGA TTTTCTCAAA CCCCCGCATT TTCATGAGGG CCTGCACCGG
AAGATCTACG AGGTCGCCTC CGACATTATC CGCATGGGCA AGACCGCCAA TCCGGTGACG
ATCAAGACCT TCCTCCCCTC AGACCAGAAG ATCGGCGATT TCACTATTGC CCAATATCTG
GCGCGGCTGG CGTCGGAAGC CGTGTCGATC ATCAATGCCG AAGACTATGG CCGGGCGATC
TACGATCTGG CCCTACGGCG CGCGCTGATC ACCATCGGCG AAGACATGGT CAATATCGCC
TTCGACGCAC CGCTCGACAT GCCGCCGCAG GCGCAGATCG AAGATACCGA GCGCCGTCTG
TTCGATCTGG CCGAAAACGG TCGCTATGAC GGCGGTTTCC AGTCCTTCAA CGATGCAGTG
GCCCAGGCCG TCGATATGGC CGGTGCCGCG TTTGAGCGCG ATGGTCATTT GTCCGGCATT
TCCACCGGCA TCCATTCGCT TGACAGCAAA ATGGGCGGTT TGCAGCGCTC TGACTTGATC
GTGCTGGCCG GACGTCCCGG CATGGGTAAG ACCTCGCTTG CCACCAATAT CGCCTGGAAC
ATCGCCGCAT CCTATGAGCC GGAAGTGCAG CCGGACGGTT CGTTCAAAGC CAAGAATGGC
GGCGTGGTCG GCTTCTATTC GCTCGAAATG TCGTCCGAGC AGCTCGCCAC CCGTATCATG
TCGGAGCAGA CCGAAGTGTC GTCTTCGAAA ATCCGCCGTG GTGATATTAC CGAGCAGGAT
TTTGAGAAGC TGGTTGGCTT TTCCCAAACC ATGCAGAAAG TACCGCTGTT CATCGACCAG
ACCGGTGGTA TTTCCATCGC CCAGCTTTCC GCTCGGGCCC GCCGCCTGAA GCGCCAGCGT
GGCCTCGATT GTCTTGTCGT GGACTATATT CAGCTGATGA CTGGCTCGGG CAAGTCAGGG
GAAAACCGCG TCCAGGAAAT CACCCAGATC ACCACGGGTT TGAAAGCACT TGGCAAGGAG
TTGAACGTGC CAATCGTCGC GCTGTCGCAG CTGTCGCGTC AGGTGGAAAG CCGCGACGAC
AAGCGTCCTC AGCTCTCCGA CCTTCGTGAA TCAGGTTCGA TCGAGCAGGA CGCCGACGTG
GTGATGTTCG TGTTCCGTGA GGAATATTAT GTGCAGAACC TCGAACCCCG CGATATGGCC
GACCCAAAAT ATCCCGAATG GGAAGCCCAG ATGGAGAAGG TGCGCGGCAC GGCGGACGTG
ATCATCGCCA AGCAGCGTCA CGGACCAACC GGCACCGTCA AACTGGCCTT CCAGGCGCAG
TTTACCCGCT TTGCCGATCT GGCCGATCCG AGCTTCACGC CGTACGAGGA GACCTGA
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| Protein sequence | MNDVARRLNP AQPAEPHYRE APNNIEAEQA LLGAILVNND AYYRVSDFLK PPHFHEGLHR
KIYEVASDII RMGKTANPVT IKTFLPSDQK IGDFTIAQYL ARLASEAVSI INAEDYGRAI
YDLALRRALI TIGEDMVNIA FDAPLDMPPQ AQIEDTERRL FDLAENGRYD GGFQSFNDAV
AQAVDMAGAA FERDGHLSGI STGIHSLDSK MGGLQRSDLI VLAGRPGMGK TSLATNIAWN
IAASYEPEVQ PDGSFKAKNG GVVGFYSLEM SSEQLATRIM SEQTEVSSSK IRRGDITEQD
FEKLVGFSQT MQKVPLFIDQ TGGISIAQLS ARARRLKRQR GLDCLVVDYI QLMTGSGKSG
ENRVQEITQI TTGLKALGKE LNVPIVALSQ LSRQVESRDD KRPQLSDLRE SGSIEQDADV
VMFVFREEYY VQNLEPRDMA DPKYPEWEAQ MEKVRGTADV IIAKQRHGPT GTVKLAFQAQ
FTRFADLADP SFTPYEET
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