| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1510 |
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| Symbol | |
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| ID | 7386473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1266603 |
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| End bp | 1267262 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650881 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549086 |
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| Protein GI | 222148129 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGT TCACCCTCTG GGATATCGCT CGCAATCTGC TGCTGGCAGT CCGCTGGACC
CTGGTTCTTT CCCTGGTTTC CTTCATCTGT GGCGGAGCGC TTGGATTGGC GCTGCTGATG
CTGCGGATTG CCAAACAGCG CATGTCCCGG ATCTTCGCGC GCGGCTTCAT CGAGTTTTTC
CAAGGCACGC CGCTGTTGAT GCAGTTGTTC ATCGCGTTTT TCGGTCTCGG CCTGTTCGGC
ATCGACGTTC CCGCCTGGCT CGCTGCCGGT GTGGCACTGA CTTGCTGGAC CGCCGCTTTC
CTGACTGAAA TCTGGCGCGG CTGCGTCGAA GCCGTGCCAA AAGGCCAGTG GGAAGCCGGC
ACCAGCCTGG CCCTCACCTA TCGCCAGCAG ATGCGGCTGA TCATCCTGCC GCAGGCCATG
CGGATCGCCA TTGCCCCGAC CGCCGGTTTT TCGGTTCAGG TGGTCAAAGG CACGGCCCTG
ACCTCGATCA TCGGCTTTGT CGAGTTGTCG AAGGCCGGAA CCATCGTCAC CAACGCAACC
TTCCAACCCT TCACCGTTTA TGGATTGGTC GCGCTGTTCT ATTTCGCCAT CTGCTACCCA
CTGTCGCGCT ACTCCAAATA TCTGGAACGC CGGTTCGGCG CGGCACCGGT CGGGCATTGA
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| Protein sequence | MIEFTLWDIA RNLLLAVRWT LVLSLVSFIC GGALGLALLM LRIAKQRMSR IFARGFIEFF
QGTPLLMQLF IAFFGLGLFG IDVPAWLAAG VALTCWTAAF LTEIWRGCVE AVPKGQWEAG
TSLALTYRQQ MRLIILPQAM RIAIAPTAGF SVQVVKGTAL TSIIGFVELS KAGTIVTNAT
FQPFTVYGLV ALFYFAICYP LSRYSKYLER RFGAAPVGH
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