| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1508 |
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| Symbol | alr |
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| ID | 7386471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1264488 |
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| End bp | 1265651 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650879 |
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| Product | alanine racemase |
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| Protein accession | YP_002549084 |
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| Protein GI | 222148127 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.453839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCTT CTTCCTTTTC CATTCCCCCC TCCGATGAGT TCCTGACCGC ACCGCTGCGC
GTCACCATCG ACCTGCAAGC GCTGGCCGAC AATTGGCGCG ATATGGCGAA GCGATCCGGC
AAGGCGCGGG CGGGTGCCGT GGTAAAAGCC GATGGCTACG GCATCGGCAT CGAGGATTCA
GGCCAGACGC TTTACAATGC CGGTGCGCGG GATTTTTTCG TGGCGCTGCC ATCGGAAGGC
GCGACCTTGC GCACCTATGC GCCGGACGCC CGGATTTTCG TGCTGTCAGG CATCTGGGAA
GGAATGGAAC CGCTGTTTTT CGAGCATGAT CTGGTGCCGG TGATTGCCAG TGAGGAACAG
CTGGCGTTCT GGATGCGGAC CGTGGCTGAC CAAGGCGATC ATCCATGCGC CCTGCATGTC
GATACCGGCT TCAACCGGCT GGGCCTCAGC ATGGACGATG CCTTGTTCCT GGCGACGGAC
GTTTCGCGCC CGGCCAGCTT TTCGCCGGTG TTGATTTTGA GCCATCTCGC CTGCGCAGAT
GATCCATCCT CGCCGATGAA CCAGAAGCAA TTGCAGGCTT TTCATCAGGT TAGCGCGGCT
TTCGAGGGCA TTGAATCAAG CCTTTCAGCC TCTGCTGGAA CTTTACTCGG CCCTGATTAC
CATTTCGACC TCACCCGCCC CGGCATCGCG CTTTACGGTG GCGAGGCGGT CACGGGCCTG
CCCAACCCGA TGCGCCCAGT GGTCAAGGCC GAGGCCCGCA TTCTCCAGAT CCGCCAAGCC
AGGAACGGAG AAACCGTCAG CTACGGTGCC ACCTGCCAGT TGACGAGAGA AAGCCGTCTG
GCCGTTGCCT CCGTCGGCTA TGCCGATGGC TACCTACGCA ATCTCTCAGG CCACGGCACG
GCATTGCGCG ATACGGGATC GCCGGGCGCC TATGGCTCTA TCGCCGGATA CCAGGTGCCG
GTTGTTGGCC GCATCACCAT GGACATGACG ATCTTCGACG TCAGTGACGT GCCGGAAAAA
GCAATTGCCG CTGGCGATTA TATCGAGCTG TTCGGACCGA ACATGCCTAT CGATGACGTC
GCCCGGGCGG CGGGTACGAT CGGCTATGAA ATGCTGACCG GCCTCGGCCT GCGCTATGAA
CGGCATTATC TGGAGGCTGA ATAA
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| Protein sequence | MSASSFSIPP SDEFLTAPLR VTIDLQALAD NWRDMAKRSG KARAGAVVKA DGYGIGIEDS
GQTLYNAGAR DFFVALPSEG ATLRTYAPDA RIFVLSGIWE GMEPLFFEHD LVPVIASEEQ
LAFWMRTVAD QGDHPCALHV DTGFNRLGLS MDDALFLATD VSRPASFSPV LILSHLACAD
DPSSPMNQKQ LQAFHQVSAA FEGIESSLSA SAGTLLGPDY HFDLTRPGIA LYGGEAVTGL
PNPMRPVVKA EARILQIRQA RNGETVSYGA TCQLTRESRL AVASVGYADG YLRNLSGHGT
ALRDTGSPGA YGSIAGYQVP VVGRITMDMT IFDVSDVPEK AIAAGDYIEL FGPNMPIDDV
ARAAGTIGYE MLTGLGLRYE RHYLEAE
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