Gene Avi_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1480 
Symbol 
ID7386450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1242780 
End bp1243274 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID643650858 
Producthypothetical protein 
Protein accessionYP_002549063 
Protein GI222148106 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.412839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTC AAACCTTGCA TGGCGGCTGC CAATGTGGCG CGGTGCGCTA CACGGCAAAA 
TCGCCGATTG GCAATCCGCA TATCTGTCAT TGTCGCATGT GCCAGAAAGC GTCGGGCAAT 
TATTTCCTGC CGCTCGGCTC GGTCAATCGT GACCTGTTTC AGCTGACACG CGGCACCCCG 
CAGTGGTTTC AGTCCTCTGA TCTGGTAAGG CGCGGCTTTT GCGCCGCCTG CGGCACACCG 
CTGTTTTTCG ATATTCCCGA GGCGGATTTC ATCAACATAA CGCTCGGATC GCTGGATGAT 
CCGGCCAGCG TCAAGCCCGT TGAACAGGCC AATCTGGACA GCAAAATGCC GTGGTTTGCA 
GCCCTCGACA CCTTACCGGT CGAGGCCAGC GAAGCCAATG CCGACTGGCT GGCGAAGGTG 
GCAGGCGCCA CCCACCAACA CCCGGACCAT GACACGAGCG AGTGGCCAAC CCATATGGGA 
TCGCCCCATG ACTGA
 
Protein sequence
MKGQTLHGGC QCGAVRYTAK SPIGNPHICH CRMCQKASGN YFLPLGSVNR DLFQLTRGTP 
QWFQSSDLVR RGFCAACGTP LFFDIPEADF INITLGSLDD PASVKPVEQA NLDSKMPWFA 
ALDTLPVEAS EANADWLAKV AGATHQHPDH DTSEWPTHMG SPHD