| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1476 |
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| Symbol | |
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| ID | 7386447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1239112 |
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| End bp | 1240035 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650855 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549060 |
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| Protein GI | 222148103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGG TTGCAGCGCC AGTGACTGAG AACCGCGACA GCCTGCGCGG CTTTCTTTTT
GCGCTTTCGG CCTATCTGCT CTGGGGATTT CTGCCCCTTT ACATGAAGGC CGTCGCGCAT
ATTCCGCCCA TGGAAGTGAT CGCCCATCGG GTGCTGTGGT CCATTCCGGT GGCCGGTCTC
GTTCTTCTGG TGCTGCGGCG CACCGATGAC CTGAAGCGAG CACTGCACAA TCCGAAAATG
ATTGGCATGG CGGCAATCAC GGCCTGCCTG ATCAGCGTCA ATTGGGGCAT TTATGTCTGG
GCCATCGGTG CCGGCCACGC GCTGGATACC GCGCTTGGCT ATTTCATCAA TCCGCTGTTT
TCCATTCTAC TTGGTGCCGT GCTGCTCAAG GAAAAACTGA AGCCGGCGCA AATGGCCGCG
CTGGCGCTGG TGGTGGTCGC CGTCGTCATC CTGACGGTCG ATGCCGGACG CCTGCCGCTG
ATCGCCCTCA GCCTTACTTT TTCCTGGGGC TTCTATGCGT TTTTCCGCAA GACGCTGCCG
ATTGGCCCCA ATCAGGGATT TCTGCTGGAA GTGCTGTTAC TTGCACCGTT TGCCCTGGCC
TACCTGATCT ATCTCGGCGT GACCGGACAG TCGCATTTCC TGGGGGCGGC GGATGCCAGC
ATGTTCAACA ATACCACGCT GCTGGCCTCA AGCGGGTTGG TCACAGCCGT GCCGCTGATC
CTTTACGCCA ATGGCGCCAA ACTTCTGCGT CTCTCCACCA TCGGCATCAT GCAATATATC
GCCCCGACGA TGATTTTCCT GATCGCCGTC TTCCTGTTTC GCGAGGAATT CAGCACCGCC
AAGGCCATTG CCTTCCCGCT GATTTGGGTG GCACTGGTCA TCTATACCTT ACCGATGCTG
AAACGGCGCC GATCAGAGCT TTGA
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| Protein sequence | MTEVAAPVTE NRDSLRGFLF ALSAYLLWGF LPLYMKAVAH IPPMEVIAHR VLWSIPVAGL
VLLVLRRTDD LKRALHNPKM IGMAAITACL ISVNWGIYVW AIGAGHALDT ALGYFINPLF
SILLGAVLLK EKLKPAQMAA LALVVVAVVI LTVDAGRLPL IALSLTFSWG FYAFFRKTLP
IGPNQGFLLE VLLLAPFALA YLIYLGVTGQ SHFLGAADAS MFNNTTLLAS SGLVTAVPLI
LYANGAKLLR LSTIGIMQYI APTMIFLIAV FLFREEFSTA KAIAFPLIWV ALVIYTLPML
KRRRSEL
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