Gene Avi_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1461 
Symbol 
ID7386434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1227284 
End bp1227931 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID643650842 
Producthypothetical protein 
Protein accessionYP_002549047 
Protein GI222148090 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG CCCCTCCTCC GATATCGGCG CGGGCTTGGC AGCGGATGCT GTCGGGCCGT 
CGCCTCGATC TTCTCGATCC ATCACCGCTT GATGTCGAGC TTTCCGATAT TGCCCATGGC 
CTGGCCCGCG TCGCCCGCTG GAATGGCCAG ACGGTTGGCG ACCATGCCTT TTCCGTGGCC 
CAGCACAGCC TTGTGGTTGA AGAGATTTTT CGCCGCTGCA ATAGCAAATA CAATGCCAAC 
GACCTGCAAA TGGCCTTGCT GCACGATGCC CCGGAATATG TGATCGGCGA CATGATCTCG 
CCCTTCAAGG CGGTGGTGGG CGGCGGCTAT AAGCTGGTCG AAAAGCGGCT GGAGGCGGCC 
ATCCATCTGC GGTTTGGGTT GCCCTCGCAT CCCACGGCCA GCCTGAAAAG CCTGATCAAG 
AAAGCCGATA GCATCGCCGC CTATTTCGAG GCCACCGAGC TTGCCGGATT TACCAGCGCG 
GAAGCCGTGC GGATCTTCGG CCAGCCGCGC CATATAACCG CCGACATGCT GCCGCTCAGC 
CCTATGCCAG CCATTGAAGC GCAGCGGCAA TTCGCGGATC GTTTTGACGC CATCGAGCGG 
CTGCGTGAGG CGGAAAATCA CAAAAAATCC GGTACGGGTG CGCCATGA
 
Protein sequence
MPAAPPPISA RAWQRMLSGR RLDLLDPSPL DVELSDIAHG LARVARWNGQ TVGDHAFSVA 
QHSLVVEEIF RRCNSKYNAN DLQMALLHDA PEYVIGDMIS PFKAVVGGGY KLVEKRLEAA 
IHLRFGLPSH PTASLKSLIK KADSIAAYFE ATELAGFTSA EAVRIFGQPR HITADMLPLS 
PMPAIEAQRQ FADRFDAIER LREAENHKKS GTGAP