| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1460 |
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| Symbol | |
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| ID | 7386433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1226751 |
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| End bp | 1227287 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650841 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549046 |
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| Protein GI | 222148089 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5350] Predicted protein tyrosine phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATT TCGTCGTCAG CCCGCTGGCC CGCCTTGCTG AGATGGCGGT GCGCCACAAG
GCGAAAGAGA TGATCAGCCT GCTGGCCAAG GGGCAGGATT TTCATCGCCC CGCAGTGATT
TCACCGGACC GCCACCTGAC GCTTGCGCTG AACGATATTA CCTTTGCCGG TAAAGGCGAT
CTCATCGCCC CGCAAGATGT GCATGTGGAA CAGATCATTC ATTTTGTGAA GGATTGGGAC
CGGACTGCGC CGCTGCTGAT CCATTGCTGG ATGGGGGTAT CACGCTCTCC AGCTGCGGCC
TTGATTGCCA GTCTCGCGTT GCATCCCGAA CAGGACGAGG AAGTCCTGGC GCTAGGCTTG
CGGGCCGCGT CGCCTTTTGC GACGCCCAAT ATCCGGATGG TGGAGATTGC CGATACCTTG
CTTTCACGCG GGGGGCGCTT CGTTGCGGCG ATGAAAAAAC TAGGCCGTGG CCAGGACGCC
GATGGCAATG CGCCGTTTGT GCTGCCGGTT CTCGCAGCCG ATCCGAGAGA TCTATAA
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| Protein sequence | MSYFVVSPLA RLAEMAVRHK AKEMISLLAK GQDFHRPAVI SPDRHLTLAL NDITFAGKGD
LIAPQDVHVE QIIHFVKDWD RTAPLLIHCW MGVSRSPAAA LIASLALHPE QDEEVLALGL
RAASPFATPN IRMVEIADTL LSRGGRFVAA MKKLGRGQDA DGNAPFVLPV LAADPRDL
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