| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1447 |
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| Symbol | lepB |
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| ID | 7386424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1218734 |
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| End bp | 1219477 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650832 |
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| Product | signal peptidase I |
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| Protein accession | YP_002549037 |
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| Protein GI | 222148080 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGGATA AAGTCGAAAA GAAGCAGAAT GCCCTTTGGG AGAACATCAA GGTCATCATT
CAGGCGCTGG TGCTTGCCAT GGTGATCCGC ACCGTGCTGT TCCAGCCTTT CACCATTCCG
TCCGGCTCGA TGATGCCGAC GTTGCTGGTG GGTGATTATA TCTTCGTCAA CAAGTTCTCC
TACGGCTATT CGAAATATTC GCTGCCTTTT TCCCTCGATC TGTTCTCCGG CCGTATTCTG
GCGAGTGAGC CCAAGCGCGG CGATGTCGTT GTCTTCCGCT TTCCGCCCAA TCCTGACATC
GATTATATCA AGCGCCTTGT CGGCCTGCCG GGCGACCGTA TCCAGGTGAC CGATGGCGTG
TTGCTGGTAA ACGGCAAGCC GATACCGAAA GTGCCGGACG GAACCTTCAC CTCCGATTAC
CGGATGGATG CCGGGCGCGA CGTGCCGGTC TTCCGCGAAA CGCTGGATAA TGGCGTCAAT
TACGACACGC TGGATGAAAT CCAGAATTCG GCTGGCGATA ATACGCGTGA ATTCACCGTT
CCCGCCGGTC ATTACTTCAT GATGGGCGAC AACCGCGACA ATTCCGCTGA TAGTCGCTTC
GACGTGGGCA TGGTTCCAGC TGAAAACCTG GTCGGCCGTG CCTCGGTGAT CTTCTTCTCG
CTTGGCAACA ATACGTCCTT CCGTGAAATT TGGAAATGGC CGTCCAATAT GCGGTGGGAC
CGTTTGTTCA AGGTTGTTCA ATGA
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| Protein sequence | MTDKVEKKQN ALWENIKVII QALVLAMVIR TVLFQPFTIP SGSMMPTLLV GDYIFVNKFS
YGYSKYSLPF SLDLFSGRIL ASEPKRGDVV VFRFPPNPDI DYIKRLVGLP GDRIQVTDGV
LLVNGKPIPK VPDGTFTSDY RMDAGRDVPV FRETLDNGVN YDTLDEIQNS AGDNTREFTV
PAGHYFMMGD NRDNSADSRF DVGMVPAENL VGRASVIFFS LGNNTSFREI WKWPSNMRWD
RLFKVVQ
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