| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1410 |
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| Symbol | |
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| ID | 7389137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1190444 |
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| End bp | 1191970 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650808 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549014 |
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| Protein GI | 222148057 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCGA CGCTCCGGCA GAAGCCCGCT TCGCTCTTCC TTCTCCTGGG CGTTTATTTC
ATCGTTCAGG TGCTGGTGCG TCTGGCCTTA CCCGCGTCGC TGGAACTGGA CGAAGGCCAG
CAGCTCTATT ATGCGCAATG GCTGTCAATC GGCTACGACA GCCAGCCGCC GTTCTACAAC
TGGATCCAGT ATGGCGTGGT GGAGCTACTC GGCCCCAACC GGTTGGCGCT GGCGCTATTG
AAAAACCTGA TACTGTTTGC CAGCTACGCA CTGATTGCGC TGGCCGCAGC GCAGGTGCTG
AAAAGCCGGG ATCTCGTCAT CATCGCCTGC CTTAGCCTGT TGACCATGCC GCAGATCAGC
TTTGAGGCAC AGCGAGACCT GACCCATACC GTCGCGCTGA TTTTCTGTAC CGCGCTGCTG
CTGTTCGGGA TTTTGCGGAC CCTGAAATCT CCCAGTCTCT GGAGCTATGC CCTGACCGGG
GCTGCCATCG GCTGCGGGTT TATTTCCAAA TACAACTTCG TCCTACTGGT CAGCGCCGCC
TTCCTCGCCA TCCTGGCGGA GCCGAAGTTT CGCCGGCGTG TGCTGGATTG GCGCATCCTG
CTGACGGCTG CCGTGGCGCT GGCCATCGTG CTACCGCATG CCCTGTGGTT TTTCCAGCAT
ATGCAGGAAG CGACGCGCAA TACGCTGGGT AAAATGACCG ATGACAATAT TACCAGCCTG
CCACAGCAGA TCTTCAAGGG TCTGACATCG CTCAGCACCG CCGTTCTGGC CAGTGCCGCG
CCCACCATGG CGCTGCTATT GATACCCTTC GCTCGGACCT TGCCCTTCCC GCATCTGCCG
CGTCCAGCCG CTTCCGTTTT GTCCGCCAGC AATGAATGGA CCCGGTTGCT GGGTCGGATG
ATGCTGCTGG TGGTCACGGT TCTGGCGTTG ATGGTGATCT TCGGCGGGGT CAGCGCCATC
AAAGACCGCT GGCTTGCGCC CTGTTTTCTG ATGCTGCCGC TCTATCTCTG CCTGAAAGTC
GAAGCGGCTG GCCTGGGCGA AGATGGCCAG TTGCGCCGCT TTCTGGTGGT AGCGCTGACC
ATCATGGTGC TGGTGCCTGT CATCCTCTAT GGCCGCGTGG TTGGTGCCGG CATTATCGGC
CATTATCAGA AGCAGAATGT ACCCTATGGC CAGGCCGTTG CCACGGCGCT GGCCTCTGCG
CCAAGCCGCC CGGTTCTGGT GCTGACCAGC GATCAGCAGA TGGCTGGCAA CATTCGCCTG
CATGCACCCG ATATTGCTGT CACCGTTCCC CCGACCAGCG GCGTACCTGT ACCAGCACGT
TTCGATGCGC AGCATCCGCT GCTGGTGATT TGGCGCAATT TCGGCAGGCC CAATCCGGAA
ATGCCGAAGG CAATGAAGGA CTGGATCGCC ACCTATCCCG GCCTTCAGGC GCAATCGGTC
GGCGAAATCG CCCTGCCCTT CCTGCATGGA CGGCCGCATT CGCTCTATTC CTTCGGCTAC
GCCCTCTATT ATTCCACCAC ACCCTGA
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| Protein sequence | MISTLRQKPA SLFLLLGVYF IVQVLVRLAL PASLELDEGQ QLYYAQWLSI GYDSQPPFYN
WIQYGVVELL GPNRLALALL KNLILFASYA LIALAAAQVL KSRDLVIIAC LSLLTMPQIS
FEAQRDLTHT VALIFCTALL LFGILRTLKS PSLWSYALTG AAIGCGFISK YNFVLLVSAA
FLAILAEPKF RRRVLDWRIL LTAAVALAIV LPHALWFFQH MQEATRNTLG KMTDDNITSL
PQQIFKGLTS LSTAVLASAA PTMALLLIPF ARTLPFPHLP RPAASVLSAS NEWTRLLGRM
MLLVVTVLAL MVIFGGVSAI KDRWLAPCFL MLPLYLCLKV EAAGLGEDGQ LRRFLVVALT
IMVLVPVILY GRVVGAGIIG HYQKQNVPYG QAVATALASA PSRPVLVLTS DQQMAGNIRL
HAPDIAVTVP PTSGVPVPAR FDAQHPLLVI WRNFGRPNPE MPKAMKDWIA TYPGLQAQSV
GEIALPFLHG RPHSLYSFGY ALYYSTTP
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