| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1399 |
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| Symbol | |
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| ID | 7389127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1178385 |
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| End bp | 1179467 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650798 |
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| Product | MFS permease |
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| Protein accession | YP_002549004 |
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| Protein GI | 222148047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGT TGCCGGAGGT GGCGCAGACC TATTCCGTCA GCGTACCCGA AGCGGGCCGG
GTTATCAGCG CCTATGCTTT GGGCGTGGTC GTCGGAGCAC CGATCATTGC CGCGCTTGCG
GCAAAGCTGC CACGAAAAAC ATTGCTGCTG ATGCTGATGG GTCTGTTTGC TCTTGGCAAC
ATCACCAGTG CCATGGCCCC AGGCTTTCTG AGTTTCACCG TCCTGCGTTT CATCACCGGT
CTGCCACATG GCGCCTATTT CGGGGTCGCC GCCTTGGTGG CCGCATCGAT GGTCGAGCCG
CACAAGCGGG CGCGCGCCGT TGGCCGCGTC ATGCTGGGTC TGACCATTGC CACGCTGATC
GGCACGCCAT TTGCCACCTT CCTTGGCCAG ATGATGAGCT GGCGGGCCGC TTTCATGCTG
GTCGGGGCAA TTGCAGCGCT GACGGCAGTG CTGATCGCGT TCAACCTGCG TAAGGACACG
GTAGCAGAAG GTGCCAGCAT TCGCCGCGAA CTCGGCGCTT TCGGCCGGTT ACAAGTGTGG
TTGGCGCTTG CCGTGGCAGC GGTTGGCTTT GGCGGCATGT TCTCAATCTT CAGCTATATC
GCCAAGACCA CCACCGACAC CGCCGGGCTT CCCGCTTCGA TGATTGCCGT GGTGCTGGCG
CTGTTCGGCA TCGGCATGAA TGTCGGCAAT GTCGTTGGCT CACGCATGGC CGATTACTCG
CTGAACGGCA CCATCGGCGG CATGCTGGCC TTCAACGTTG TGCTGATGAC GATCTTTTCG
CTGACTGCCG CCAATCCGGT CATGCTGTGC ATCTGCGTCT TTCTGACCGG CTGCGGTTTC
GCCGCCTGTC CCGCCGTGCA GACGAGACTG ATGGATGTCG CAGCCGACGC CCAGACGCTG
GCTGCCGCTT CCAATCATTC AGCCTTCAAC ATTGCCAATG CGCTCGGTGC CTGGCTGGGC
GGCATGGTGA TTTCCGCCGG CTATGGCTAT GGCGCAACGG GCTATGTCGG CGCGGTTCTT
TCCCTGCTTG GCCTTATCGT TTTCTTGATT TCGGTAGCGC TTCAGCGCCG ATCAGCATCA
TGA
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| Protein sequence | MGLLPEVAQT YSVSVPEAGR VISAYALGVV VGAPIIAALA AKLPRKTLLL MLMGLFALGN
ITSAMAPGFL SFTVLRFITG LPHGAYFGVA ALVAASMVEP HKRARAVGRV MLGLTIATLI
GTPFATFLGQ MMSWRAAFML VGAIAALTAV LIAFNLRKDT VAEGASIRRE LGAFGRLQVW
LALAVAAVGF GGMFSIFSYI AKTTTDTAGL PASMIAVVLA LFGIGMNVGN VVGSRMADYS
LNGTIGGMLA FNVVLMTIFS LTAANPVMLC ICVFLTGCGF AACPAVQTRL MDVAADAQTL
AAASNHSAFN IANALGAWLG GMVISAGYGY GATGYVGAVL SLLGLIVFLI SVALQRRSAS
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