| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1371 |
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| Symbol | ragB |
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| ID | 7389107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1145685 |
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| End bp | 1147091 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650778 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548984 |
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| Protein GI | 222148027 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTG CCGGATTTCT GTTCAAGTCT ACCGCCGTCA GGCTTTCGGC GCTTTACATC
ATTCTTTTCG CGCTTTGCGC CGCTCTTCTG GTGATCTATG TCACGGCGCT TTCGGAACGG
CTGCTCAATC AGCAGACGCG AGAGAGCCTG CAACAGGAAG TGACCGAAAT CGAGCGCGCT
TATGAAAAAG GTGGCGTCGA AAATCTGCTG CGGCTGATGG AACGGCGCAT GCGCCAGCCC
GGTGCCAATC TCTATGTCAT TGCCGGGCCA AATGGCGAGT TTCTGGCGGG CAATGTCAGC
TCCGTCGAGC CGGGCGTGCT GGATCGCGAG GGCTGGACGA ATTTTCCCTT CGCTTATAAC
CGCTATGCCG AAACAGGGCC TGCCCGCCCG CATCTGGCGA TTGCCAATGT GCTGGCGCTG
GACAATGGGC TGCGCATTCT GGTCGGGCGG GATCTGGGTG AGCCGACCAA ATTCCGCATT
CTGGTGCGCA AGGCGCTGAT GGTGGCGCTG GCGATCATGG GGGCAGGGGC TTTGGTGATC
TGGTTTGCCA TTGGCCGCAA TGCCCTAAAG CGCATCGATC GGGTCTCTGC CGCCAGCAAG
AAGATCATGG CGGGCGATCT TGGCCAGCGT CTGCCGGTCT CCGGTTCCGG CGATGAATTC
GACCGGCTGT CGCGCTCACT GAACGACATG CTGGAGCGGA TTGAAAAGCT CAATGAGGGC
CTTCGCCAAG TCTCCGACAA TATAGCGCAT GATCTGAAGA CGCCGCTGAC CCGGCTGCGC
AACAAGGCCG CCGATGCGCT GGCCGAGGAT GATGACCTGC TGCGCCGTCA GGCGCTGGAA
GGGATTATCG GCGAATCGGA TCAGTTGATC CGCACGTTCA ACGCGCTGTT GATGATTTCT
CGCGTTGAGG CAGGCTCGAT TGCCGCCGAG CTTTCCGATC TTGATGCCTC CGGCATTGCC
GCTGATACCG CCGAGCTTTA CGAGCCGGTG GCCGAGGAGG CGGGCTATGT GCTGGCAAGC
GCTATTGTCC CCGGCATCAC TGTGCGGGGC AATCGCGAAC TGATCGGCCA GGCGATTTTC
AACCTGCTCG ACAATGCCAT CAAATATGCG GGTGAAGGCG GCAGCGAAAT CCGCGTCGAA
CTGGTGAAGG CGGCGAACGG CGAGGCCCGA CTCAGCGTCT GCGACCATGG CCCCGGCATC
GCGGCGGAGC GCCGGGAAGA TGTCGTCAAG CGTTTCGTGC GGCTGGATGA AAGCCGCAGC
AAACCGGGCA CCGGTCTTGG CCTGTCGCTG GTCGAGGCGG TGATGGCGCT GCATGGCGGC
AGACTGGAAC TGAGCGACAC CAATTCTACC AATTCCGAGT GTCCCGGACT GACGGCCACC
ATGGTCTTTC CGCGTGTAAC CGCATAA
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| Protein sequence | MSRAGFLFKS TAVRLSALYI ILFALCAALL VIYVTALSER LLNQQTRESL QQEVTEIERA
YEKGGVENLL RLMERRMRQP GANLYVIAGP NGEFLAGNVS SVEPGVLDRE GWTNFPFAYN
RYAETGPARP HLAIANVLAL DNGLRILVGR DLGEPTKFRI LVRKALMVAL AIMGAGALVI
WFAIGRNALK RIDRVSAASK KIMAGDLGQR LPVSGSGDEF DRLSRSLNDM LERIEKLNEG
LRQVSDNIAH DLKTPLTRLR NKAADALAED DDLLRRQALE GIIGESDQLI RTFNALLMIS
RVEAGSIAAE LSDLDASGIA ADTAELYEPV AEEAGYVLAS AIVPGITVRG NRELIGQAIF
NLLDNAIKYA GEGGSEIRVE LVKAANGEAR LSVCDHGPGI AAERREDVVK RFVRLDESRS
KPGTGLGLSL VEAVMALHGG RLELSDTNST NSECPGLTAT MVFPRVTA
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