| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1344 |
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| Symbol | |
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| ID | 7389087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1125575 |
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| End bp | 1126819 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643650758 |
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| Product | MFS permease |
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| Protein accession | YP_002548964 |
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| Protein GI | 222148007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.105092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTC TCCCCGCCGA TTCTCCCAGT CCCGTTCCCC AAAATGCCGC ATCGCTGGCA
CGCTTGCGGC TGCTGAGCGT GCTGTCCATC AGCCAGATTG TCGGCTGGGG CACGAGTTTC
GACCTGTTCG GCGTTCTCGG CCGCACCATC GCCGCCGATA TCGGCATCAG CAACGAGACC
GGCTTTCTCG GTGCCACGGT GATGCTGCTG ATCATGGGTT TTGCCGGACC GGCCAGCGGC
CGCCTGCTGG AAAGGCACGG GGCCGCCAAG GTCATGGCTG CGGGCTCGGT TGTGTTTGCC
TTCGGCCTCG CACTGCTCTC GCAAGCCCAA GGCATGGCTT CCTATTTCGC CGCCTGGTTC
ACCATCGGCA TTGCTGGCAC CTTGGCGCTC AGCGTGGCCT GCTATACGGC AGTCGTCGAG
CGAGAAGGCT CGTCGGCGAA AAGCGTGATC GGCCTGCTGA TGATTTTCAC CGGCCTTTCT
ACAGCGATTT TCTGGCCGCT GCTCAGTTGG CTGACTGGCC TGCTGGGCTG GCGCGATACC
TTGCTTATTG CAGCGGCCTG CCATCTTCTG GTGCTGGTTC CCCTGCATCG CTTCGCCCTG
CCGCCCATCA AAGCCCGGTC GCAAACGGCG CAAGCCGCAG CCGACCGCGA ACCGATGCCG
CTGACAGCAC TCCAACAAAA GCGGGCGATG ATCGCGCTTG CCATCATCAG CATCGGCTTC
AGCAGCGTCA CCTTCGGCGT CTCGTCTTCG TTGATTGAAA TGCTGACGCA GGCTGGCGCC
ACACCGGCGC TAGCGCTGCA ACTGGGGTCG CTTCGCTCGG TGCTCGGCAT TTCCGCCCGC
GCTGCCGATA CCCTTGCCGG AAAACGCGCC TCGCCCGTCA CATCAGGCCT TGTGGCAACC
GGACTGATCG TCATCGGCTT CCTGGCACTC GCATTCGGCC ATGGCTCCGT ATGGATGCTC
GGCCTGTTTA TCGGTGCCTA TGGCATCGGC TCCGGCCTGT CGGCCATTTC GCGCACCGTG
CTGCCGCTCG GCTTCTTTTC CGCCAGCCGC TACGCCGGGA TCTCAGCCAA ACTGGCGCTG
CCCGGTAATA TCTCCCAGGC GCTGTCGCCG GTGGTGATCG CTGGTCTGCT GGATCGCGGC
GGCCTGCCGC TGCTTCTGAC CTTCACCCTC GCCGTCAGCG CTCTGGTGCT GGCAGCACTG
GTCTTTCTGG CCATGCTGGC GCGCGGGACC AAAATCATTC GATGA
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| Protein sequence | MSALPADSPS PVPQNAASLA RLRLLSVLSI SQIVGWGTSF DLFGVLGRTI AADIGISNET
GFLGATVMLL IMGFAGPASG RLLERHGAAK VMAAGSVVFA FGLALLSQAQ GMASYFAAWF
TIGIAGTLAL SVACYTAVVE REGSSAKSVI GLLMIFTGLS TAIFWPLLSW LTGLLGWRDT
LLIAAACHLL VLVPLHRFAL PPIKARSQTA QAAADREPMP LTALQQKRAM IALAIISIGF
SSVTFGVSSS LIEMLTQAGA TPALALQLGS LRSVLGISAR AADTLAGKRA SPVTSGLVAT
GLIVIGFLAL AFGHGSVWML GLFIGAYGIG SGLSAISRTV LPLGFFSASR YAGISAKLAL
PGNISQALSP VVIAGLLDRG GLPLLLTFTL AVSALVLAAL VFLAMLARGT KIIR
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