Gene Avi_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1339 
Symbol 
ID7389084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1124126 
End bp1124695 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content61% 
IMG OID643650755 
Producthypothetical protein 
Protein accessionYP_002548961 
Protein GI222148004 
COG category 
COG ID 
TIGRFAM ID[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0490882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CCACCCTCAC TCCGCCGCAG GCGGAGCCGC TGACCCTTGT CGATGTGAAG 
GCGCAATTGA AGATCGATAC CGATGATGAA GACGATCTTC TCTCCGGTCT GATCACCGCT 
GCCCGCCTGC ATCTGGAGGC CGAGACCGGG CTTTGCCTGA TGCGCCAATC GCTGCGGCTC 
TATCTGGATG ACTGGCCTGA CAGCGAGGTG ATTCAGCTTC CCAAAGGCCC GGTGCAAACC 
ATTGATGCCG TGACGGTTTT TGATGAAAAT GGCGATGAAC TTCATGTTTT ACTGAAAGAT 
CATCTGCTGG ATGGACAGGC GCGGCCAGCT CGGCTGTGGC TGCGGGAACG GCCCTTGCCG 
GGACGGCCGA TCAACGGCAT CGAGATCGAC TTTACCGCAG GCTTCGGCAC GGCGGCCACC 
GATGTGCCGG ATACGCTGCG CCGGGCGATG AGCCTGCATG TTGCGGCCAT GTATGCGTTT 
CGGGGTGTAG TGGCGCTGGC CGATCAGCCT GCTGCCCTGC CGGTCGGCTA TGAACGGCTG 
ATCGCGCCCT TCTGCCGAAA GGGCCTTTGA
 
Protein sequence
MTITTLTPPQ AEPLTLVDVK AQLKIDTDDE DDLLSGLITA ARLHLEAETG LCLMRQSLRL 
YLDDWPDSEV IQLPKGPVQT IDAVTVFDEN GDELHVLLKD HLLDGQARPA RLWLRERPLP 
GRPINGIEID FTAGFGTAAT DVPDTLRRAM SLHVAAMYAF RGVVALADQP AALPVGYERL 
IAPFCRKGL