| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1276 |
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| Symbol | |
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| ID | 7387648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1071419 |
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| End bp | 1072561 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650709 |
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| Product | transcriptional regulator AraC family |
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| Protein accession | YP_002548915 |
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| Protein GI | 222147958 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGGG GTATAAGTGC CACTGAAACT CATTACGCAC TCGCTCAAAA ATCCTTGTTC
CATGGTCTTC GCCCCATGAT CTTCCTGCCG ATTTCCTTTT TCGTCGCCCT GCTGCTTGTG
ACCCTGTTGA TCCGTATGCT GCGGCAGGAG GACGCCCCGG CCTCCGCGAG GCCTTTCCTG
CTGCTGCTGG CGGTGATGGC GGTCCAATCG GTTCTGGTCG GCTTGCGCTG GGGCTATGGC
ATGATGCTGG TCATGCCGGC CATGTCGGTT CTCGGAACGG TCATCCCGCC TTTGAGCTTT
CTGGCCTTTC GCAGCCTGAC CTCGAGCCGT GCGGATCGGC AGGATCGTGG TTTCTCGCAT
ATTGATTGGC TGCATGCCCT GCCGGCTGTC ATCGTGCTGG TGCTGAACGG CGTCGGCGGT
GGGCCAATCG ATGCCATCAT CATCCTCACC TTCCTGGCCT ATGGACTGGC GCTGCTCTGG
CTGGCGCGGC TGGGGCCGGA TGGGCTGACG GCCTCGCGTC TGGACGGGGC GCTTCGGTCC
TACCGTGCCC TGCAATGCAT GGCAGCCTCG CTGCTGGCCT CGGCGGTTGC CGATGTCGTC
ATCAGCCTCG ATTTTGCCTT TGGCGGTGGC CGTCATGCGG CAACTATTGT TTCGGCTTTC
ATGACCATGA TCCTTCTGGC ACTTGGCTTT GCTGCATCAC TGGCCGAAAG TGGCGCTTCT
TCAGATGAGG AAGACCCTTC AGTTGACAAT GGGCGCGAAG AGGAGCGGGC TGGCGACAAG
CCGGTGCCGA GACCCGCGAG CGAGGAGGAC GCGCGGATTG CCAGCGCGCT GGCGGCGATG
ATGGTGGAAA AACAGCTCTA CAAGGATGTG GACCTTAACC TTGGCCGGCT GGCGCGTCGC
CTGGGCCTTC CCGCCAGATC CGTGTCGAAT GCCGTCAACC GGGTGCATGG CATGAGTGTT
TCGCAGTATG TCAATAATCA CCGCGTAACA GAGGCCTGCC AACTGCTGCG ACAGAGCGAT
GAGCCGATTA CCAGCATCGT CTTTGAGGCC GGTTTTATGA CCAAGTCCAA TTTCAATCGA
GAGTTTCTGC GGGTCACGGG ACAAAGTCCC AGTGCCTGGC GACGGCAGGA GACGATTGCA
TAA
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| Protein sequence | MIGGISATET HYALAQKSLF HGLRPMIFLP ISFFVALLLV TLLIRMLRQE DAPASARPFL
LLLAVMAVQS VLVGLRWGYG MMLVMPAMSV LGTVIPPLSF LAFRSLTSSR ADRQDRGFSH
IDWLHALPAV IVLVLNGVGG GPIDAIIILT FLAYGLALLW LARLGPDGLT ASRLDGALRS
YRALQCMAAS LLASAVADVV ISLDFAFGGG RHAATIVSAF MTMILLALGF AASLAESGAS
SDEEDPSVDN GREEERAGDK PVPRPASEED ARIASALAAM MVEKQLYKDV DLNLGRLARR
LGLPARSVSN AVNRVHGMSV SQYVNNHRVT EACQLLRQSD EPITSIVFEA GFMTKSNFNR
EFLRVTGQSP SAWRRQETIA
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