Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1265 |
Symbol | |
ID | 7387641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1066481 |
End bp | 1066891 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643650702 |
Product | hypothetical protein |
Protein accession | YP_002548908 |
Protein GI | 222147951 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAGAA AGATCATTGT TCCCGTGGAC ATCGCGCAAT GGGAAAAAGG CGACAAGATC CTGCGAAAAG CCCAGAGCCT GCTGGATGCT GGCGGCGAGA TCGTGTTGTT GACCGTGGTC GAGCACCTGC CATCCTATCT CGCCATCGAT ATTCCGCATG ACATCCTCGA TGGAGCGGTG GAGGAGGGGC GCACGAAACT CGCCGCGCTG GCGGCTTCGG TTGGGCCTGG CGTGACGACG CAATTGCGGG TCGGTTCGCC CGCCCATGAG ATTCTGGCGG TCGCGGCGGA GCAAAAGGCC GACTTGATCA TTATCGCTTC GCATATCCCG GATTTTTCCA ACTACCTGAT CGGGGCGACT GCCGACCGCG TCGTGCGCCA CGCCCGATGC GCGGTACTTG TCGACCGGTA A
|
Protein sequence | MYRKIIVPVD IAQWEKGDKI LRKAQSLLDA GGEIVLLTVV EHLPSYLAID IPHDILDGAV EEGRTKLAAL AASVGPGVTT QLRVGSPAHE ILAVAAEQKA DLIIIASHIP DFSNYLIGAT ADRVVRHARC AVLVDR
|
| |