| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1258 |
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| Symbol | ptrB |
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| ID | 7387635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1058071 |
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| End bp | 1060200 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650696 |
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| Product | protease II |
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| Protein accession | YP_002548902 |
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| Protein GI | 222147945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.125554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTCTTGT CTTCACCCTC AAAGTCCCTG TTTGCCAACC TGCCCACCGC CCCCACGGTC
CAGAAGAAAC CGCTGAGCGA CACCCGCCAC GGCATCACCC GCATTGACGA CTACGCGTGG
CTGCGGGCCG ATAACTGGCA GCAGATGTTC AAGGACACCT CGATCCTTGA TCCGGAGATC
CGCGCAGTTC TGGAGGCCGA AAACACCTAT ATGGACGCGG CCATGGCCGA TACCAAGCCA
CTGCAACAGC AGCTGTTTGC CGAGATGAAA GGCCGGATCA AGGAGGATGA CAGCTCCATA
CCGATGAAGG ATGGTCCTTA TGCTTACGGT TCGGCTTTCG TGACCGGTGG CGAGCAGCCG
CGCTATTTCC GCATTCCACG CGACGGCGAC CCAAAAGACG AGAGCCTGCG CGAATTGCTG
CTGGATGGCG ACAAGGAAGC GGCGGGCAAG GATTATTTCC GCCTGTCCGG CATCGACCAT
AGCAATGATC ATGCCCGTGG CATCTGGGGC TATGATGACA AGGGGTCGGA ATATTACACG
CTACGCATCC GCGATCTCAA AACCGGCGAA GATCTGGCCG ATGTGCTGGA CAATACCGCT
GGCGGCGGCG TCTGGGCACC CGATGGCAAG AGCTTTTTCT ATACGCTTCA GGATGAAAAC
CACCGCCCGT CCAAAGTCTT CCACCATATT ATCGGCGAGC CGCAATCCTC CGACCGGCTG
GTCTATGAGG AAAAGGACCC CGGCTTCTTC ATGGGGGTCG GCGGGTCGCT GCTCGATGAC
TTTATCTATA TCGACATCCA CGATCACGAG ACCTCGGAAT ACCGGCTGCT GTCCACCAAA
GATCTGACGG CAGAACCTAA GCTGGTGGCT GAGCGCGAGG AAGGCGTCGA ATATTCGATG
ACCGAGGGCG GCGATGTGTT CTACATCCTG ACCAATGCCG ACGGTGCCCA GGATTTCAAA
ATCATGGAAG CGCCGGTTGG CGCGCCGGGC AAGGAGAACT GGAAAGACCT CGTTCCCCAT
GTGCCGGGCC GTCTTATCCT GTCGCATATG GCCTTTGCCG GACATCTGCT GTGGCTGGAA
CGCCGCGATG GCCTGCCGCG CATCATGATC CGCGACCGCA AGACCGGCGA AGAACACGCT
ATCGATTTTG CCGAGGAAGC CTATTCGCTT GGCCTGTCAG GCGCTGCCGA ATATGATGCC
ACCGTCATCC GTTTCTCCTA TTCGTCGATG ACGACGCCCA GCCAGCTCTA TGACTATAAC
ATGGTGACGC GCGAGCGGGT GCTGCTGAAA ACCCAGGAAG TGCCATCGGG CCATAAGGCC
GAGGATTATG TGACCCGCCG GGTATTCGCC AAGGCGCATG ATGGCGTCGA TGTGCCGGTC
ACGCTGCTTT ATCGCAAGGA CACGGCCCTT GATGGGTCCG CCCCCTGCCT GCTTTACGGC
TACGGCGCTT ACGGTGTGAC CATTCCGGCT GGTTTCAACA CCAATTGCCT GTCGCTGGCC
GACCGGGGTT TCGTCTATGC CATCGCCCAT ATCCGCGGCG GCAAGGACAA GGGCTTCCAA
TGGTACGAAG ACGGCAAGAT GGAGAATAAG GTCAATACCT TCAAGGACTT CATCTCCGCC
GCCGATCATC TGGTGAAAGA AGGCTTCACC GCCTATGACA AGATCATCGC CGAAGGCGGC
TCGGCTGGCG GCATGTTGAT GGGCGCCGTC GCCAATATGG CACCCGACAA ATTTGCCGGC
ATCATCGCCG CCGTTCCCTT TGTGGACGTG CTCAACACCA TGTTGGATGA TACCCTGCCG
CTGACCCCGC CCGAATGGCC GGAATGGGGC AACCCCATCG AGTCAGAAGA AGAATACCGC
TGGATCGCCG CCTATAGCCC CTATGACAAC GTAGGCAAAA AATCCTATCC GCCCATTCTC
GCCCTATCCG GCCTCACCGA CCCCCGCGTC ACCTATTGGG AACCCACCAA ATGGGTGGCC
AAACTGCGCG AAAATGCACC CGATGCCGGG CCATATCTGC TGAAAACCAA CATGTCCGCC
GGCCACGGCG GCAAATCCGG GCGGTTTCAG CGGTTGGAAG AGGTGGCGTT TGAATATGCC
TTTGCGGTGA AGATGGCGGG GAAGATGTGA
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| Protein sequence | MLLSSPSKSL FANLPTAPTV QKKPLSDTRH GITRIDDYAW LRADNWQQMF KDTSILDPEI
RAVLEAENTY MDAAMADTKP LQQQLFAEMK GRIKEDDSSI PMKDGPYAYG SAFVTGGEQP
RYFRIPRDGD PKDESLRELL LDGDKEAAGK DYFRLSGIDH SNDHARGIWG YDDKGSEYYT
LRIRDLKTGE DLADVLDNTA GGGVWAPDGK SFFYTLQDEN HRPSKVFHHI IGEPQSSDRL
VYEEKDPGFF MGVGGSLLDD FIYIDIHDHE TSEYRLLSTK DLTAEPKLVA EREEGVEYSM
TEGGDVFYIL TNADGAQDFK IMEAPVGAPG KENWKDLVPH VPGRLILSHM AFAGHLLWLE
RRDGLPRIMI RDRKTGEEHA IDFAEEAYSL GLSGAAEYDA TVIRFSYSSM TTPSQLYDYN
MVTRERVLLK TQEVPSGHKA EDYVTRRVFA KAHDGVDVPV TLLYRKDTAL DGSAPCLLYG
YGAYGVTIPA GFNTNCLSLA DRGFVYAIAH IRGGKDKGFQ WYEDGKMENK VNTFKDFISA
ADHLVKEGFT AYDKIIAEGG SAGGMLMGAV ANMAPDKFAG IIAAVPFVDV LNTMLDDTLP
LTPPEWPEWG NPIESEEEYR WIAAYSPYDN VGKKSYPPIL ALSGLTDPRV TYWEPTKWVA
KLRENAPDAG PYLLKTNMSA GHGGKSGRFQ RLEEVAFEYA FAVKMAGKM
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