| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1225 |
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| Symbol | |
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| ID | 7387615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1039707 |
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| End bp | 1040855 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643650676 |
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| Product | peptide synthetase |
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| Protein accession | YP_002548882 |
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| Protein GI | 222147925 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | [TIGR01746] thioester reductase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.289629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AGAAAAACGT TTTTCTTACA GGTGCAACTG GTTTCATAGG CGCATACCTT
CTTACCGAAA TGCTCAAAAG TTCTCATATC GGGAAAATTT ATACTTTGTG CCGCAGGTTC
GATCCGCAAA ATGATAGGGA TAGAATTCTA CTTTCATTCA AGAAATTCTC CATAGAGATG
GATAGGGCTT ATTTATTTAC CGACCAGATC CAAGTCGTGG AAGGTGACAT AACAATGCCC
CGTTTTGGAC TGTCTGACTC CACCTACGAA ATGATATGTC AGGAAGCCGA TCTTATCCAT
CATGTCGCCG CGCGGGTGAA TCACATTCAG CCTTATGAAT TGCTCAAGAA ACCCAATGTA
GATAGCATGG CAGATGCCAT TATCATGGCT TCCCGTGGGA AGCAGAAAAT CGTGAATTTC
GTATCAACGT TAGGCTCCGC AGTTACGCGG GATAGCATTG GTAATTATCT AGAGGACTTT
CCAGACAACA CAGCCCTAGA ATCTGATATG GGATATCTGC TTTCAAAATG GGAAGGAGAA
AAACTACAAG CAAAATTCAT AGCCGAAGGG GGTAAAACAA ACCTGTTTCG CCTCGGTTAT
ATATCCGGAC ACAGTACGTC TGGAGTTTCT TTATTTGAAA ACAACCAGTT TATGCTTTTC
GTAAAAAGCT GCATTCAACT CGGCCATGCG CCAGAGCTAG ATAGAACAAT CAACTTCACA
CCCGTTGATT ACACAGTAAA AATTATGAAT TCTCCAAAGT ATACTATTGA GGGTGGACAC
GTTTTAAATC TATTCAATTT TACAGGTTTG ATCGAGTGGA AAAATGTCGT TCAGTGGCTA
AATGCACGAG GATATGAAAT ATCGATAATT CCTTTCTATG AATGGCAGAA GTTACTTTTG
TCTGATGGTG AAAGTAATCC ACTTTATCGT CTTCTACCAC TTTACGGCAG CGACAACGCT
CACGAAAAAA TCCTACGTTT TGGACGAGAA ATTCACAAAT ACCGCTACGA CAATGTCTGC
GCTGCAACGA TCGAAAATGA TGTCTGGCCC CCCCGACTCA AGTTTGAGTT ACTAGATACG
TATTTGAGCT ACTTGCAGAG TCAGGAATTC TTACCAGCAC CAACCATGAT GGAATCATGT
GCGGCATAG
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| Protein sequence | MSEKKNVFLT GATGFIGAYL LTEMLKSSHI GKIYTLCRRF DPQNDRDRIL LSFKKFSIEM
DRAYLFTDQI QVVEGDITMP RFGLSDSTYE MICQEADLIH HVAARVNHIQ PYELLKKPNV
DSMADAIIMA SRGKQKIVNF VSTLGSAVTR DSIGNYLEDF PDNTALESDM GYLLSKWEGE
KLQAKFIAEG GKTNLFRLGY ISGHSTSGVS LFENNQFMLF VKSCIQLGHA PELDRTINFT
PVDYTVKIMN SPKYTIEGGH VLNLFNFTGL IEWKNVVQWL NARGYEISII PFYEWQKLLL
SDGESNPLYR LLPLYGSDNA HEKILRFGRE IHKYRYDNVC AATIENDVWP PRLKFELLDT
YLSYLQSQEF LPAPTMMESC AA
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