| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1218 |
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| Symbol | |
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| ID | 7387608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1032105 |
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| End bp | 1032860 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643650669 |
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| Product | ABC transporter |
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| Protein accession | YP_002548875 |
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| Protein GI | 222147918 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.157715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGCC TGAAGCTCGA CCGCGTCGGA GCCCGCTATG GCCGCGCCCA GGTGTTTGAA
GACATCAGCA CCGATTGGCT GACCGGCGGC GAAATGACCG CGCTGATCGG CCCGAATGCG
GCGGGCAAAT CCACCCTGTT CAAGCGCATT GCCGGGCTGA TTTCCGGCCC CGGCGTGGTT
GCCGTGGAAG ATGTGCGCGA AGGCTACCGC CCGATCTGTT ACATGCCACA GGATACCGGC
GCCAATGCGG TGCTGACCGT CTATGAAAGC GTGCTGCTGG CCGCCAAGCA GGGCGGCGGC
TGGCGGGTGG CCGATGGTGA ACTCAACGAT ATCGACCGGA TTCTGGCCGC ACTGCGCATC
TCCGATCTCG CCTTCCGCGA CCTCGGCGCG CTGTCGGGCG GCCAGCGGCA ATTGGTGGCA
ATTGCCCAGG CGCTGGTGCG CAAACCGGAA GTGCTGCTGA TGGACGAGCC GACCTCGGCG
CTCGATCTGT TCCGGCAAAT CGAAGTGCTG GAATTCATGC GCAAAATCGC CACCCGCGAA
GGCATTGCCG TGCTGATCGC GCTGCACGAC CTAAACCATG CGCTTCGCTA TTGCAGCCGC
ACTCTCGTCA TCGGCGGCGG CAAGCTGATC GCCTCAGGCC CCACCGAAGA CGTCATCACC
CCTACACTGC TGCGTGACGT CTACCGCGTC GATGCCCGCA TCGAGGCATG CAGCCAGGGG
CGCTTGCAGG TGATTGTCGA TGGGGCTTTG GTGTGA
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| Protein sequence | MVSLKLDRVG ARYGRAQVFE DISTDWLTGG EMTALIGPNA AGKSTLFKRI AGLISGPGVV
AVEDVREGYR PICYMPQDTG ANAVLTVYES VLLAAKQGGG WRVADGELND IDRILAALRI
SDLAFRDLGA LSGGQRQLVA IAQALVRKPE VLLMDEPTSA LDLFRQIEVL EFMRKIATRE
GIAVLIALHD LNHALRYCSR TLVIGGGKLI ASGPTEDVIT PTLLRDVYRV DARIEACSQG
RLQVIVDGAL V
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