| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1142 |
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| Symbol | |
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| ID | 7386208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 965634 |
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| End bp | 965999 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643650614 |
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| Product | nucleic acid-binding protein |
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| Protein accession | YP_002548820 |
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| Protein GI | 222147863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAAAG CGCTGTTCGA TACCAATATC CTGATCGATT TTCTGAACGG CAAGGAACCA
GCCAGGCAGG AGCTTTCGCT TTACGAGGAA AAGGCGATCA GCATGGTGAC CTGGATGGAG
GTCATGGTTG GCGCATCCGA TGAGAACGGG CAAGCGACCG CTGCTTTTCT TCGCAGTTTT
CGCTGCATTG CTATCGATCA GACCGTGGCC GAGCGTGCAG TTGCGTTGAG GCGTGCGCAT
CGGCTGAAAC TGCCTGACGC GATTGTCTGG GCAAGTGCTC TGGCCCATGA CATGCTGCTG
GTAACCCGGG ATACCAAGGA TTTGCCGGGC AATCATCCCG GCATCCGCAT TCCCTATCGG
CTGTGA
|
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| Protein sequence | MVKALFDTNI LIDFLNGKEP ARQELSLYEE KAISMVTWME VMVGASDENG QATAAFLRSF
RCIAIDQTVA ERAVALRRAH RLKLPDAIVW ASALAHDMLL VTRDTKDLPG NHPGIRIPYR
L
|
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