Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1140 |
Symbol | |
ID | 7386206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 964066 |
End bp | 965355 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643650612 |
Product | hypothetical protein |
Protein accession | YP_002548818 |
Protein GI | 222147861 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAATG CATTGGAAAC CGACGTTTCA ATCAAGCCCG GACGATTTTT CCTGGTTGCC GGGATAGGTC TTGGCTGGCA TGCGGCCAGC AAGCTCTTGC GCCTTGTGTT GGCGCTTGGC CTTGCGGCTT TGTCGCTGCT GTCGATTGAA TTCCTGCTGG AGCCCCTGGC GGAGCTTGGC CTCGTTTACA AACTGCATCA GGATATTGGC GGCGCGAGCT TAGCGACGCT GTCATTGCTG GGTGCCATCG CGGCTGGCCG TGTTGTTCAG CAGCAGATCA GGCCGGTTCG GGCGGGTGCA TCACCTGCTC ATACACAATT GGCTGGGCGC ATCGTGCGGG AAAATTCCCG GGCGGCGGCA GGCCTGGTGG CGCTCGGCGA TAAGCAGGTG CTGTTTTCCA ATGAGGGTGA TGCTTTCCTG ATGTATGCAC GCCGCGGTCG TCGGTTCGTC GTGCTGTTCG ACCCGGTCGG ACCACGGGCT GCCTGGCCGC AGCTGGTGAC GAAATTGCTG AAAGAGGCAA AGGCTTGCGG CTGCCGCGTT GCCTTCTACC AGGTCTCCCC GGACTTTCTG CCTGTTGCGG CGGATGCGGG CCTGCGGCTG TTCAAGCTGG GCGATCAGGC GATTGTCGAT CTGCACCGTT TCGACCTGAA GGGTGGCGAC TGGCTGAAAC TGCGCCGCTC GATCAACCGC GCCGAGCGCG ACGGACTGGA ATTTGCCATT GTGCCGCCAG CCGAAGTAGC GGGATTGCTG GATGAACTGG CTTACGTTTC GGATGTCTGG CTGGCCCATC ACAAGGCCGG AGAAAAGGGC TTTTCGCTCG GCACCTTCCA GCGCTGTTAT CTCTGCGCCC ATCCGGTTGC CATCATTCGC CTTGAAGGCC GGATTGTCGC CTTTGCCAAT ATTCTGACCA CCGAGACAAA ACAGGACGCC TTCATCGACC TGATGCGGCA TCTGCCCGGC ACGCATCGCG GCATGATGGA CCTGCTGTTC GTGAAGATCA TGCTGCATCT GAAAGCGGAA GGCTATCGCC AGCTTGACAT GGGCATGGCG CCGCTGTCCG GCCTGTCGGA CCGAGCGTCC GCCCCGCTTT GGCACCGCCT TGGCCGTCTT GTCTATGAGA ATGGCGAGCG GCTCTATAAT TTCAAAGGCG TCCACGCCTT CAAGGCTAAG TTCGATCCCG ACTGGCAACC CCGCTACCTC GCCGTCAGCG ACCGGCGTCA AGCATTGCCC GCCGTGGTCG ATACCGCGCT GCTGATCAGC GGCGGGATCA AAAAACTGGT GCGGCGATAG
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Protein sequence | MVNALETDVS IKPGRFFLVA GIGLGWHAAS KLLRLVLALG LAALSLLSIE FLLEPLAELG LVYKLHQDIG GASLATLSLL GAIAAGRVVQ QQIRPVRAGA SPAHTQLAGR IVRENSRAAA GLVALGDKQV LFSNEGDAFL MYARRGRRFV VLFDPVGPRA AWPQLVTKLL KEAKACGCRV AFYQVSPDFL PVAADAGLRL FKLGDQAIVD LHRFDLKGGD WLKLRRSINR AERDGLEFAI VPPAEVAGLL DELAYVSDVW LAHHKAGEKG FSLGTFQRCY LCAHPVAIIR LEGRIVAFAN ILTTETKQDA FIDLMRHLPG THRGMMDLLF VKIMLHLKAE GYRQLDMGMA PLSGLSDRAS APLWHRLGRL VYENGERLYN FKGVHAFKAK FDPDWQPRYL AVSDRRQALP AVVDTALLIS GGIKKLVRR
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