Gene Avi_1092 details

Gene Information

• Locus tag: Avi_1092
• Symbol: mutY
• ID: 7386172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 920753
• End bp: 921919
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643650576
• Product: A/G-specific adenine glycosylase
• Protein accession: YP_002548784
• Protein GI: 222147827
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1194] A/G-specific DNA glycosylase
• TIGRFAM ID: [TIGR01084] A/G-specific adenine glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATGA AAACCCGAAA ACCTGCCGAA CAAACCCTTC ACGAAGACGG GCTTCACCAA 
GATGGGCCTC ACCAAGAGGG ACTAAGCGCT GACGAGCTTC TCGCCTGGTA TGACCGCCAT 
CACCGTGACC TGCCCTGGCG GATCTCGCCG CCAATGGCGG CGCGCGGTAT CAGGCCCGAT 
CCCTATCACA TCTGGCTGTC GGAAGTGATG CTGCAACAAA CGACGGTGCA GGCGGTCAAA 
CCCTATTTCC TGAAATTTCT GGCCCGCTGG CCGAAAGTCA CCGATCTGGC TGCCGCCCCC 
ACCGAGGACG TAATGGCGGC CTGGGCAGGC CTTGGCTATT ACGCCCGCGC CCGCAACCTG 
AAGAAATGCG CCGAGGCCGT CGCCGATCTG CATGGCGGTG TCTTTCCCGA CACCCAGGAC 
GGCCTGCAAT CCCTGCCCGG CATTGGCGAT TATACCTCCG CTGCCATTGC CGCCATTGCG 
TTTAACCGGC AAGCGGCGGT GATGGACGGC AATGTCGAGC GGGTGATATC AAGGCTATAC 
GCGATCTCCG ATCCGCTGCC AGGGGCCAAA CCGGCGATCA AAGCGCGGGT AGCAGCACTG 
ACGCCCATTG AGCGGCCCGG CGATTTCGCG CAAGCGATGA TGGATCTGGG CGCGACGATC 
TGCACGCCAA AACGGCCTGC CTGTTCGCTC TGTCCGTTCA ACGCCCACTG TCTGGCGCTG 
AAAGCCCATG ATCCCGAGCA TTTTCCGGTC AAGGCAGCGA AGAAGACCAA GCCGGTGCGG 
CTTGGTGCCG CCTTCATCGC TCTTGATGAC CGCAACCGCA TCCTGTTGCG CAAGCGCGCC 
GACAAGGGGC TTCTGGGTGG CATGACGGAA GTGCCGACTA CCGAATGGAC GGCCCGCATC 
GACGGCGACG ACAGCGAGGC CAGCGCGCCG ATGGACGCCA ATTGGCGCGC CTGCGGGGTC 
GTCACTCATG TGTTTACCCA TTTCGAGCTG CGTCTGACGA TCTTCCGGGC CGATGCGGTC 
AAGGGACGGC CCGACGATTA CCATTGGGCC GATCACGGAT GGTGGGAGCC GCTCATCAAT 
CTTGAAGCCC AGGCCTTGCC GACAGTGATG AAAAAGGCGA TCACCCAGGC TATACCCGAG 
GCCTTCGCAG CCAGAAAAAT GGAATAG 

 

Protein sequence

MSMKTRKPAE QTLHEDGLHQ DGPHQEGLSA DELLAWYDRH HRDLPWRISP PMAARGIRPD 
PYHIWLSEVM LQQTTVQAVK PYFLKFLARW PKVTDLAAAP TEDVMAAWAG LGYYARARNL 
KKCAEAVADL HGGVFPDTQD GLQSLPGIGD YTSAAIAAIA FNRQAAVMDG NVERVISRLY 
AISDPLPGAK PAIKARVAAL TPIERPGDFA QAMMDLGATI CTPKRPACSL CPFNAHCLAL 
KAHDPEHFPV KAAKKTKPVR LGAAFIALDD RNRILLRKRA DKGLLGGMTE VPTTEWTARI 
DGDDSEASAP MDANWRACGV VTHVFTHFEL RLTIFRADAV KGRPDDYHWA DHGWWEPLIN 
LEAQALPTVM KKAITQAIPE AFAARKME