| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1048 |
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| Symbol | |
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| ID | 7387134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 886835 |
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| End bp | 887560 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650542 |
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| Product | cytochrome oxidase complex biogenesis factor transmembrane protein |
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| Protein accession | YP_002548750 |
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| Protein GI | 222147793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3346] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.520132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTGCGA TGACGCGTGT AAGGCTTGCC GCAAGCGGCT TTCTGGTGCT GGTCGCCCTG
GCGCTGCTGG TCTCGCTTGG CACATGGCAA ATGCATCGTC TGGCCTGGAA GGAGGGCCTG
ATTGCCGATA TCGAATCGCG CCGCCATCAG CCCCCAGCCA GCGTCGAGGA CATCGATGCG
CTGGCGCGCG GTGGCGGAGA TGTCGATTAC CGGGCCATGA CCGCCTCCGG CACCTATCTC
AACGACAAGG AACGCCGTTT CCTGGCGACC TATGACGGCG ATGCCGGTTT TTACATCTAC
ACGCCGTTTC AGCTTGCCGA TGGACATATT CTCTTCGTCA ATCGCGGTTT TGTGCCGGAG
CAGAAGAAGG AGCCTTCGAC ACGCATGGGT GGACAATTGC TGGGCCTCCA GCGCGTCACC
GGCCTGGCGC GGGCGAAACT GGCGGAAAAG CCCTCCCGGT TGGTGCCGGA CAATGATATC
GCCAAGAATG TGTTTTATTG GAAAGATCTT GATGCCATGG CCGCCAGCAC CGGGATCGAT
ACGGCCAAGG TTCTGCCGTT TTTTCTGGAT GCAGGGCCGT CGCCGGTGCC CGGCGGCCTG
CCGATCGGCG GTGTCACGAT GATCGACCTG CCCAATAGTC ACCTGCAATA TGCCTTGACC
TGGTACGGTC TGGCGCTTGC TCTGGCGGTG ATCGCAGTTA TTTCGGTTTT CAGAAAGAAA
ACCTGA
|
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| Protein sequence | MGAMTRVRLA ASGFLVLVAL ALLVSLGTWQ MHRLAWKEGL IADIESRRHQ PPASVEDIDA
LARGGGDVDY RAMTASGTYL NDKERRFLAT YDGDAGFYIY TPFQLADGHI LFVNRGFVPE
QKKEPSTRMG GQLLGLQRVT GLARAKLAEK PSRLVPDNDI AKNVFYWKDL DAMAASTGID
TAKVLPFFLD AGPSPVPGGL PIGGVTMIDL PNSHLQYALT WYGLALALAV IAVISVFRKK
T
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