| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1028 |
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| Symbol | |
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| ID | 7387118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 871732 |
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| End bp | 873186 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650526 |
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| Product | MFS permease |
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| Protein accession | YP_002548734 |
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| Protein GI | 222147777 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATTC AGGAGATTAA CCCCGAATCC GCAGAGACTG ATGCGACGAT GCCGGAGAAT
GGGCATTGGC GCGATCTGTT CGCCCCGGGC CTCGGAGCAG CAACCGTCAT GGTCAGCCTT
GGTGTTGGAC TGCATGCTTT CAACGCCTTC CTTGTTTCAA CCGCCCTGCC CTCGGCCATT
GCCGAGCTTG GTGGCGCGCA GTGGTTGCCC TGGACCAGCA CGCTTTATCT GGCCGCATCG
ATTGTGGCAG GCGCAAGTTG CGCCAGCCTC AAGGCCCGGG TCGGCACCCG AGGCGCGCTC
GCTATCGTCA CGTTGATATT CCTGGCGGGA ACACTAACCG CCGGTCTGGC GGGATCGATG
GCGGGCATCA TCATCGGGCG GGTCTTGCAG GGGCTTGGGG AAGGCGCTGT CCTGGCTCTG
TGCTATATGC TGATCTCGAC GCTGTTCCCG CGCAGGTTGA TTGCCCGCAT TTTCGGTATC
GAAGCCGCCG TCTGGGCGGT GTCGGCCTTT GGGGGGCCAG TACTGGCCGG GCTGTTGACT
GAGGCGATTT CGTGGCGCGC AGCCTTCCTC GTCAACGTCC CCGCCGGCAT CGTCTTTCTG
ATTTTGGCCA GGATCGCCGT TCCAAAAGGG GAGAAAAATG GCAAAAAACC GGCCAATCCG
GGTGGCTTGC CGATAGGCCG ACTGAGCCTG CTGCTGGTCG GGCTGGTGCT CCTGCTGGCC
GCAAATCTGA CGGCGCTGGA GATCTCCCGA AACACCATGA TCGGCATGGC GCTTGCCGCT
TGTCTGCTGT TTGTCGCGCT CGACAGAAAC AGTCTTCAGC CGATCCTGCC CGCGGGCGCC
TTTGTGGCGT CAACACCGGT CGGGCTTGGC CTGTGGATCG TGTTGCTCAT GCCACTTTCC
GAAGCGGCTC TTGGCGTCTA TCTCGTCTAT ACGCTGCAAC ATCTCTGGTC GATGGGACCA
ATGGCAGCGG GTGCGTTGAG CGCGCTGATG GCGGTCAGCT GGAGCCTAAC GGCTGTAATC
ACCGCCAATA TCTCCACCCA AAAAGCCAGA GAAAGACTGA TCCTGCTGGG GATCTTCACC
GAGGCTGGCG GCCTTGCCGG CATCACGCTT GCCATTGCAA CCGGTCACCT ACCGGGACTG
ATCCTGTCGC TTATCGCCGT GGGCATGGCC TTTGGCATGG CGTGGGCGGC GCTCAGCCAG
ACAATGATGG AGGCGAGCCC ACCTGACGAC CGCGACCGGA CCTCAGCACT TTTGCCCACA
TTGCAGACCG CCGGTTATGC CATGGGGGCC GCACTGGCCG GTCTCATTGC CAATCGCTCA
GGCTTTTCCG GCACGGCATC GCCGGAGGTG CTGCGCCATG CGGTCGGCAA TAGCGTCCTG
TTTGGCCTGG CCTGCCTTGC TCCGGCAATC CTGCTGGCGC CCTGGATGGT GAGAAGCCTG
AGGAAAACCC GGTGA
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| Protein sequence | MEIQEINPES AETDATMPEN GHWRDLFAPG LGAATVMVSL GVGLHAFNAF LVSTALPSAI
AELGGAQWLP WTSTLYLAAS IVAGASCASL KARVGTRGAL AIVTLIFLAG TLTAGLAGSM
AGIIIGRVLQ GLGEGAVLAL CYMLISTLFP RRLIARIFGI EAAVWAVSAF GGPVLAGLLT
EAISWRAAFL VNVPAGIVFL ILARIAVPKG EKNGKKPANP GGLPIGRLSL LLVGLVLLLA
ANLTALEISR NTMIGMALAA CLLFVALDRN SLQPILPAGA FVASTPVGLG LWIVLLMPLS
EAALGVYLVY TLQHLWSMGP MAAGALSALM AVSWSLTAVI TANISTQKAR ERLILLGIFT
EAGGLAGITL AIATGHLPGL ILSLIAVGMA FGMAWAALSQ TMMEASPPDD RDRTSALLPT
LQTAGYAMGA ALAGLIANRS GFSGTASPEV LRHAVGNSVL FGLACLAPAI LLAPWMVRSL
RKTR
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