| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0967 |
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| Symbol | |
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| ID | 7387750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 815239 |
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| End bp | 816306 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650478 |
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| Product | cation efflux system protein |
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| Protein accession | YP_002548686 |
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| Protein GI | 222147729 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.31347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCGG ACCCGACGTC TCACGGCCAC GATTCGCATC AGCATCACCC TCATGACCAC
CATCCTCACG GGCAAGGCGG TCATGCTCAT CCGCATCATC ATGGGCCGGG CAATCGCCAC
AGCCATGTCT TTCTTGGCCG GAACCATCAA CGCAATGAGC GTCGCACCTG GGCGGTGATT
GGCGTCACCA CGGTGATGAT GGTGGTGGAA ATCGTCGCGG GCAATCTGTT CGGCTCCATG
GCGCTGACGG CGGATGGCTG GCATATGGCC ACCCATGCGG GGGCGATTTT TGTGTCGGCG
CTGGCCTATA GCCTGGCGCG GCGCCATGCT GATAACAGTG GTTTTACCTT CGGGACCGGC
AAATTTGGTG ATCTGGCCGC CTTTTCCAGC GCGATCTTTC TCGGCCTCGT GGCTGTTATC
ATTGCCTGGG AAAGCCTCTG GCGGGTGTTT CAGCCGGTCG CCATCGACTT TAGCGAAGCC
ATCGTCATCG CGATTATCGG TCTGGCCGTT AATCTGGTCT GTGCGCTGCT GCTTCAGGAA
GATCATCATC ATGGACACGG CCATCAATAT GACCATGACC ATGACCATCA CGAGCACGGC
CATCACGCTC ATTCCGAAGC CATCGGCAGC CATGCTGGCG GCGACCGTAA TTTGCGCGCT
GCCTATATCC ATGTGCTGGC GGATGCGTTG ACATCGGTGA TGGCGATTGC AGCCTTGCTG
CTCGGCAGTG TTTTCGGCTG GCTCTGGCTC GATCCGCTGA TCGGCGTTGT CGGTGCGCTG
GTCATCGGCA GCTGGGCCTT CGGCCTGATG CGCGATAGCG GCATGGTTCT TCTCGATCAT
GTCTCGGATG GCGAAGATCT CTCCGGCACT ATCCGCCGGG TGATCGAAGC GGAAGGGGCC
GATATTGCCG ACCTTCACGT CTGGCAATTG GGCCCCGGTC ATCACGGTGC CATCGTTTCG
CTGGTGGCAC GCGAGCCGCA ATCTCCTGCC TGGTACCGCG AAAAACTGTC CCAGATTGCC
GCTCTATCCC ATGTGACTGT CGAGGTTGAG CGCGCCGAGG CAGCATAA
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| Protein sequence | MIPDPTSHGH DSHQHHPHDH HPHGQGGHAH PHHHGPGNRH SHVFLGRNHQ RNERRTWAVI
GVTTVMMVVE IVAGNLFGSM ALTADGWHMA THAGAIFVSA LAYSLARRHA DNSGFTFGTG
KFGDLAAFSS AIFLGLVAVI IAWESLWRVF QPVAIDFSEA IVIAIIGLAV NLVCALLLQE
DHHHGHGHQY DHDHDHHEHG HHAHSEAIGS HAGGDRNLRA AYIHVLADAL TSVMAIAALL
LGSVFGWLWL DPLIGVVGAL VIGSWAFGLM RDSGMVLLDH VSDGEDLSGT IRRVIEAEGA
DIADLHVWQL GPGHHGAIVS LVAREPQSPA WYREKLSQIA ALSHVTVEVE RAEAA
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