Gene Avi_0934 details

Gene Information

• Locus tag: Avi_0934
• Symbol: atpF
• ID: 7387725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 785710
• End bp: 786195
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643650453
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_002548661
• Protein GI: 222147704
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATATG ATGCAACTTT CTTCGCTTTT GTTGGCCTGG TGCTGTTTCT GGCACTGATT 
GCCTATCTCA AAGTCCCGGG CATGATGGCG AAGTCGCTGG ATGCACGTGC AGACAATATC 
CGTGACGAAT TGGCGGAAGC CAAGCGCCTG CGGGAAGAAG CCCAGCAATT GTTGGCGGAA 
TATCGTGCCA AGCGCAAACA GGCTGAAGCG GAAGCTCAGG CCATCGTTAC CGCCGCCGAG 
CGCGAAGCAG CCGCCCTGAC GGAAGAAGCC CGTCAGAAGA CCGAGGAATT CGTTCAGCGC 
CGCAATGCGC TGTCGGAACA GAAGATCAAG CAGGCCGAAA CCGACGCCAT CAATGCGGTT 
CGCTCGGCTG CTGTCGATCT TGCAATCTCG GCTGCAGAGA CCCTGTTGAA GCAGAAAGTC 
GACGCCCAGT TGCAGTCAGG CCTGTTTAAT TCGTCTGTCA GCGAAGTGAA AAACCGTCTG 
AACTGA 

 

Protein sequence

MQYDATFFAF VGLVLFLALI AYLKVPGMMA KSLDARADNI RDELAEAKRL REEAQQLLAE 
YRAKRKQAEA EAQAIVTAAE REAAALTEEA RQKTEEFVQR RNALSEQKIK QAETDAINAV 
RSAAVDLAIS AAETLLKQKV DAQLQSGLFN SSVSEVKNRL N