| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0898 |
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| Symbol | |
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| ID | 7387702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 759583 |
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| End bp | 760323 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650430 |
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| Product | phosphatase |
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| Protein accession | YP_002548638 |
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| Protein GI | 222147681 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.214916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGAC GCGGCACTGT GACTGATGAC CTTGCCCGAT CAGCCCCTAA AATTGGCGGA
ATTCTGTTCG ACAAGGATGG CACGCTGTTG GATTACGACG CCAGTTGGGC GCCGGTGAAC
CGGCAACTGG CACTGATGGC CGCCGATGGC GACCAGACGC TGGCCGATCA ATTGCTCGGC
GCCTGCGGCA TGGACCCCGA AAGCGGTTAT GTGGTTCCCG ACAGCCTGCT GGCGGCGGGC
AATGCCCGTG AGATCGCCGA GGGACTGGCC AAGGCGGGGT CGCCCTTCGA TGCCGATTAT
CTCACCGAAG CGCTGGATGC GATTTTCGCC AATGCCGCCG AGCTTTCCGT GCCGGTGACC
GATCTTGGTG CGCTGTTTGC AAAGCTGCGA CAGCGCGGCC TGAAGCTCGG TATCGCCTCC
TCCGACAACG AGCGCTCGAT CCGTGCCATC GTCCAGCGGT TCGGGCTTGA GCCGCATGTG
GATTTCATTG CTGGTTACGA TAGCGGATTC GGCTGCAAGC CGGAGCCGGG CATGGTGCAT
GGCTTTTGCC AGGCGACCGG CCTTGCCCCC GCAAACGTAG CCGTGGTCGG CGACAATAAT
CACGACCTGT TGATGGGCCG CAATGCAGGC GCCGGGCTTT CAATTGCCGT GCTGACTGGC
ACCGGATCGC GCCTGACGCT GGAAGCCGGA AGCGATTACT GCTTGAACGA CATTACCGAA
CTTGAACAGG TCCTGGGTTG A
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| Protein sequence | MIGRGTVTDD LARSAPKIGG ILFDKDGTLL DYDASWAPVN RQLALMAADG DQTLADQLLG
ACGMDPESGY VVPDSLLAAG NAREIAEGLA KAGSPFDADY LTEALDAIFA NAAELSVPVT
DLGALFAKLR QRGLKLGIAS SDNERSIRAI VQRFGLEPHV DFIAGYDSGF GCKPEPGMVH
GFCQATGLAP ANVAVVGDNN HDLLMGRNAG AGLSIAVLTG TGSRLTLEAG SDYCLNDITE
LEQVLG
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