| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0747 |
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| Symbol | fliP |
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| ID | 7386253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 638512 |
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| End bp | 639249 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650324 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_002548534 |
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| Protein GI | 222147577 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCGAA CCCTTATCTT GATCGCCGCG ATGATAGCGG CCCCGGAACT GGCCCAGGCG
CAGCAGCTTC CGTCAAACTT CCTGACGGCG CCGGTCGACG GCTCCGTCGC GGCCTGGATT
ATCCGCACCT TCGGTCTGCT GACAGTTCTT TCGGTTGCTC CCGGCATCCT GATCATGGTG
ACGAGCTTTC CGCGCTTCGT GATCGCGTTT TCCATTCTGC GCTCCGGCAT GGGTCTATCC
AGCACGCCGT CCAACATGAT CCTGACCAGT CTTGCCCTGT TCATGACCTT TTATGTCATG
ACGCCGGTCA TGGATCAGGC CTGGCGTGAC GGTGTGCGCC CGCTTCTGGA CAACCAGATT
ACCGAGGCCG AGGCTGTTCC CAGGATTGCG GAGCCTTTCC GGGGCTTCAT GTCCAACAAT
ACCCGCGAGA AAGACCTCCG GCTGTTCATC GATCTGGCCA ACGAGCGCGG GCAGACGACG
GTCGTTGAAG GCAAGGTCGA TTACCGGGTA TTGATCCCGG CTTTCATGCT GTCAGAGATC
CGGCGCGGCT TTGAAATCGG CTTCCTGATC ATCCTGCCTT TTCTGGTCAT CGACATGATC
GTCTCGACCA TCACCATGGC CATGGGCATG ATGATGTTGC CGCCGACGTC GATTTCCCTG
CCGTTCAAGA TCCTGTTCTT CGTGCTCATC GATGGCTGGA ACCTTCTGGT CGGTAGTTTG
GTGCGCTCAT TTTCCTGA
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| Protein sequence | MIRTLILIAA MIAAPELAQA QQLPSNFLTA PVDGSVAAWI IRTFGLLTVL SVAPGILIMV
TSFPRFVIAF SILRSGMGLS STPSNMILTS LALFMTFYVM TPVMDQAWRD GVRPLLDNQI
TEAEAVPRIA EPFRGFMSNN TREKDLRLFI DLANERGQTT VVEGKVDYRV LIPAFMLSEI
RRGFEIGFLI ILPFLVIDMI VSTITMAMGM MMLPPTSISL PFKILFFVLI DGWNLLVGSL
VRSFS
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