| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0738 |
|---|
| Symbol | fliE |
|---|
| ID | 7386496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 633762 |
|---|
| End bp | 634136 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643650317 |
|---|
| Product | flagellar hook-basal body protein FliE |
|---|
| Protein accession | YP_002548527 |
|---|
| Protein GI | 222147570 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATT CTATTAGCAA AATTGGCTCT CTCGTTCCAT CGGGCATGAC TGAGGGCACC
GACGCAACAA GCACGGCCTC GCTCGGTGGT ACACATTCGC TCTTCAGCAC GCAGACGGGC
GTCGCGGCGC AGAATGCGAC ACCGGGTACC GCAACAGGCA TGAGCTTCAG CGATGTTGTC
GGCGGCGTGA TGAACGATGC GATGCAGAAC CTGAAGACCG CTGAAAGCAA CTCCCTCGAC
GGCATGCTCG GCAAGGTCAG CACCCGCGAA GTGGTTGATT CCGTCATGTC TGCGCAGAAA
TCGCTGCAAA CGGCGATTGC GCTGCGCGAC AAGCTGGTTT CGGCCTTCCT CGACATCACA
AAAATGCAGA TTTAA
|
|---|
| Protein sequence | MIDSISKIGS LVPSGMTEGT DATSTASLGG THSLFSTQTG VAAQNATPGT ATGMSFSDVV
GGVMNDAMQN LKTAESNSLD GMLGKVSTRE VVDSVMSAQK SLQTAIALRD KLVSAFLDIT
KMQI
|
|---|
| |