| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0731 |
|---|
| Symbol | fliI |
|---|
| ID | 7388751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 630695 |
|---|
| End bp | 632089 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643650313 |
|---|
| Product | flagellum-specific ATP synthase |
|---|
| Protein accession | YP_002548523 |
|---|
| Protein GI | 222147566 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03498] flagellar protein export ATPase FliI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.978274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTG AATTCACCCC TCGGATCGAC AGGAATACCC AGCTGGATGC CATGGCAGCC
ATTGCCAAGC GCTATGCCAC GTCGGACTAT TCCGTTGCCC ATGGCGGGCA TGTCCGCACC
ATTGCCGCTG GCCATTACAC GGTTACGGGT CTGTCGCGCC ATTTGCATCT GGGTGATTTT
GTTGCTCATC GCAGTCCAAC CGGCATTCAC CTGGGCGAAG TGGTGCGGGT CGAGCCCGAT
CTCGCCTATG TTTGCCCCAT CGAGCCGGGC GAGCCGATTG CCATTGGCGA CACGGTGATC
CGCAAGGGCG CCTTCCGGGT CGCCGCCCAG GATAGCTGGT GTGGCCGCAC GCTCAATGCG
CTGGGTGACC CGATCGACGG GCTGGGGCCG GTGATGCCCG GCCTGGTGCG CCGCTCTATT
GCCAATACGG CACCCTCTTC CATGGGGCGC AAGCGGGTAG AGACCGGTTT TCGTACCGGC
GTGAAGGCGG TCGATATTTT CTCGCCGCTT TGCCTTGGCC AGCGGCTTGG GATTTTCGCC
GGTTCCGGCG TCGGTAAATC GACGCTGTTG TCCATGCTGG CCAAGGCCGA CGCCTTTGAC
AAAGTGGTGA TTGCGCTGGT CGGCGAACGT GGCCGCGAAG TGCGCGAATT CATCGAGGAT
ACGCTGGGCG ACAACATGGC GAAGACCGTG GCGATCGTGG CGACCAGCGA CGAGAGCCCG
ATGCTGCGCA AGATGGCGCC TTTGACAGCG ATTACCGTTG CCGAGCATTT TCGCGACCAG
GGCGACAATG TCCTGTTCAT CGCCGACAGC ATTACCCGTT TCGCCCATGC GATCCGCGAA
GTGGCGACGG CAGCCGGCGA ACCGCCGATT GCCCGTGGAT TTCCCGCCTC TGTCTTCACC
GAGCTGCCCA AGCTTTTGGA ACGCGCCGGT CCCGGCGAAG AGGGAACAGG CACGATCACG
GCGATCATTT CGATCCTCGT CGATGGTGAC AATCACAACG ACCCGATTGC CGACTGTACC
CGCGGCATTC TCGATGGCCA CATCGTGCTG GACCGCAGCC TGGCCGAAGA AGGACGCTAT
CCGCCGATCA ATCCACTGGC CTCGATTTCG CGTTTGGCGC GCAAGGCCTG GACACCTGAT
CAGGAGAAGC TCGTGTCGCG CTTGAAGACG CTGATCCACC GTTTCGAGGA AACGCGCGAC
TTGCGGTTGA TCGGCGGTTA TCGCGCCGGC AGCGATCCCG ATCTCGATAT GGCGATCAAG
CAGGTTCCGA TCCTTTACGA AGTGCTGAAG CAAACCCCCT CCGACAGGGC TGTCGTCGAT
GCCTATGCCG ACCTCGCCCA TGCCCTGAAG GCGGCCAATA ATTCTGGAAA CAGCAATGCA
AGATCAAGAG CATGA
|
|---|
| Protein sequence | MTVEFTPRID RNTQLDAMAA IAKRYATSDY SVAHGGHVRT IAAGHYTVTG LSRHLHLGDF
VAHRSPTGIH LGEVVRVEPD LAYVCPIEPG EPIAIGDTVI RKGAFRVAAQ DSWCGRTLNA
LGDPIDGLGP VMPGLVRRSI ANTAPSSMGR KRVETGFRTG VKAVDIFSPL CLGQRLGIFA
GSGVGKSTLL SMLAKADAFD KVVIALVGER GREVREFIED TLGDNMAKTV AIVATSDESP
MLRKMAPLTA ITVAEHFRDQ GDNVLFIADS ITRFAHAIRE VATAAGEPPI ARGFPASVFT
ELPKLLERAG PGEEGTGTIT AIISILVDGD NHNDPIADCT RGILDGHIVL DRSLAEEGRY
PPINPLASIS RLARKAWTPD QEKLVSRLKT LIHRFEETRD LRLIGGYRAG SDPDLDMAIK
QVPILYEVLK QTPSDRAVVD AYADLAHALK AANNSGNSNA RSRA
|
|---|
| |