| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0724 |
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| Symbol | fliN |
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| ID | 7388747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 627055 |
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| End bp | 627717 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650309 |
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| Product | flagellar motor switch protein FliN |
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| Protein accession | YP_002548519 |
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| Protein GI | 222147562 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACGA AAAAAACACC CGTAAAAGAT GATGATGCCC TGGCGATGCC ATTGGGCGAT
GCCGATCTCG ATCAGGCAAT CGATGACCTG CGCGGGGTCT TGAAAAGCGA CAGCGATGGC
GGTCTGCCGG ATATCGGCGC CGACTTCGGG GGAACGGATT TCGCAGCCGC TGGCGCCAGC
GACTTCGGCG ATGCCGCTGG CGGCCTTTCC GATTTCGAAA GCGATTTCGG CGGCGGCGCA
GCCACAGGTG CCAGTGATTT CGGCACCAGC GACTTTGGCG GCAGCGATCT CGGCGGTGGC
GATTTCGGTG GCGGCGATTT TGGCGGGAGC GACTTGGGTG GCGGCGACTT CGGTGGCGGG
GGCAGCTTCG ATGCCGCACC GGCCCATCAG GCGCCGGGCA GTGCTCTGGA CTCCAATCTC
GACCTGATCA TGGACATCCC GATCGATGTT CAAATCGTGC TGGGTTCCAG CCGCATGCCG
GTTTCGGGCT TGATGAATCT TGAAGAGGGC GCAATCATAG CGTTAGATAA AAAGATCGGT
GAACCTGTGG AGATCATGGT TAACGGTCGA CGGATTGCCC GCGGAGAGAT TACAGTTCTT
GAGAATGACG ATACGCGATT CGGTGTGAAA TTGATCGAAG TTATGAGCAC CAAGACGTCC
TGA
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| Protein sequence | MATKKTPVKD DDALAMPLGD ADLDQAIDDL RGVLKSDSDG GLPDIGADFG GTDFAAAGAS
DFGDAAGGLS DFESDFGGGA ATGASDFGTS DFGGSDLGGG DFGGGDFGGS DLGGGDFGGG
GSFDAAPAHQ APGSALDSNL DLIMDIPIDV QIVLGSSRMP VSGLMNLEEG AIIALDKKIG
EPVEIMVNGR RIARGEITVL ENDDTRFGVK LIEVMSTKTS
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