| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0710 |
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| Symbol | |
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| ID | 7388735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 610760 |
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| End bp | 611791 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643650298 |
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| Product | Integrase protein |
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| Protein accession | YP_002548508 |
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| Protein GI | 222147551 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCA AACTCATTAA GCGACACGGC GGTAAAAATT GGTATATCCG CGGTACCATC
CGAGGCGTCT CAGTGGACGA AACTACAGGA ACTGACGACA AGAAAAGGGC GGAAGAAATC
CGTATCCGAC GCGAAACGGA AATCCTCGAC CGTCGTATCC ATGGAATCAG AAAAACAGCG
ACGTTCCTTG AAGCCAGTGT GATGTATCTA GAAGAGGGCG GCGCAAGCCG GTTTGTGGAT
GTTGTTGCCC GTTACTTTGG CACCACGCCA CTCTCCGAGA TCGACCAACC GGCAATAGAT
CGGGCGGCAC GGGTTCTCTA TCCTGATGCC AAAGCATCCA CCAGAAACCG GCAGGTCTTC
ACGCCGGTTT CTGCCGTCCT CAACTTTGCC GCAAAAAAGA AGATGTGTGA CAAGCCTATC
ATTGAACGGC CTGCCCAACC CAAAGGGCGA ATTCGATGGA TTACCATCGA AGAAGCGCAG
TCGTTGATTG ACGCCTGTGC ACCGCACCTC AAGCCTCTTG TGACGTTTCT GTTTTATACG
GGCGCGCGGC TATCCGAGGC GCTTTATCTC GACTGGCGAG ACGTGGACCT TTCACGGTCG
CACGTTGCCT TCTTGGATAC CAAGACGGGC GACGATAGAG GTGTTCCGCT CCACTCTGGC
GTGGTCGCAA TGCTGGCGAA CTTGCCGCAC CGTGAAGGTG CGGTTTTTCG TCGGCATGAT
GGCAAGCCTT ACGAAGTGAA GGAAGACGGC GGCGGGCAGA TCAAGACCGG GTTCAAGGGC
GCTTGCCGTA GAGCCGGGAT TTCCGACTTC CACCCCCACG ATTGCCGCCA CACATGGGCG
ACCTGGCACT ATGCCGCAAA CCGCGACCTT ATCACCTTGA TGAGACTCGG CGGCTGGAAA
TCTGAGCGCA TGGTTTTGAG GTATGCGCAC ATCAACGTCG ATGATCTTGC AAGCTCGATA
GAATCCATTC CTTGGGGAAA ATCCGGGGAT GTGAACAGCG GTCAAAAGAA AAACGTAAGG
AAAACAAAGT GA
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| Protein sequence | MSLKLIKRHG GKNWYIRGTI RGVSVDETTG TDDKKRAEEI RIRRETEILD RRIHGIRKTA
TFLEASVMYL EEGGASRFVD VVARYFGTTP LSEIDQPAID RAARVLYPDA KASTRNRQVF
TPVSAVLNFA AKKKMCDKPI IERPAQPKGR IRWITIEEAQ SLIDACAPHL KPLVTFLFYT
GARLSEALYL DWRDVDLSRS HVAFLDTKTG DDRGVPLHSG VVAMLANLPH REGAVFRRHD
GKPYEVKEDG GGQIKTGFKG ACRRAGISDF HPHDCRHTWA TWHYAANRDL ITLMRLGGWK
SERMVLRYAH INVDDLASSI ESIPWGKSGD VNSGQKKNVR KTK
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