| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0669 |
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| Symbol | gcvA |
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| ID | 7388706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 574298 |
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| End bp | 575197 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643650271 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002548481 |
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| Protein GI | 222147524 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCA AGATTCCCAG CAATTCCGCA CTCATGGCGT TCGAGGCGTC GGCGCGCCAT
GGCAGCTTCG CTCGCGCGGC CGACGAACTG GCCCTGACCG AAGGGGCGAT CAGTCGGCAG
ATAGGCCGGT TGGAAGCCTT CCTCGGCGTC ACGCTGTTCG AGCGCGTCGG CAATCGCGTC
CGGCTTTTGC CGAATGGAGA ACGTTATGCG GTTCAGGTCC GCGAGGCACT CGACCGGCTG
GAGCGCGACA GCCAATATCT GATGGGGCAG CCGAGCGATG GCGCGAGCCT CGACATTGCA
ATCCTGCCGA CGTTCGCCAC CCGCTGGCTC ATCCCGCGTC TGAAGTCGTT CCAGGAGCGG
CATCCGCATA TCACCCTGCA TCTTGCGGAA CGGATGGAGC CATTCGTTCT CACCGGCAGC
GGATTCGACG CCGCCATCCA TTTTGAACAT CCTGCCTGGA CGGGAATGCG GACGCACCGC
TTGCTGCATG AGGTGCTGGT TCCAGTTTGC CATCCGGGGC TGATCAGGGG CCGAGACCCT
GCCACAGCCC TCGATGCGCT GCCGCGGCTC CATCGCCGCC AGAACCCGGA GGCCTGGCAA
CGCTATGCCG AAGAGGCCGG GGTCGTGCTG ACCAATCCTA CGATAGGTCC ACGCTATGAT
CTTCACTCCA TGCAAATCGA AGCTGCGTTG GCCGGTCTCG GCGTTGCGCT CGTGCCGCGC
CTCTATATCG AAAGCGAACT GGCGGAAGGT CGCTTGGTCG CGCCTTGGCC TGATGGGGAG
TCGATCTCCA AGACCTTCTG CCTCATCCTG CCGGAGCCGA TCCGATTGAG CGACGCTCCA
ATACAGGTGT TCGCAAATTG GCTTCTCAAG GAGGTGCAAC CGTCAAATCC AGCCTCTTGA
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| Protein sequence | MRRKIPSNSA LMAFEASARH GSFARAADEL ALTEGAISRQ IGRLEAFLGV TLFERVGNRV
RLLPNGERYA VQVREALDRL ERDSQYLMGQ PSDGASLDIA ILPTFATRWL IPRLKSFQER
HPHITLHLAE RMEPFVLTGS GFDAAIHFEH PAWTGMRTHR LLHEVLVPVC HPGLIRGRDP
ATALDALPRL HRRQNPEAWQ RYAEEAGVVL TNPTIGPRYD LHSMQIEAAL AGLGVALVPR
LYIESELAEG RLVAPWPDGE SISKTFCLIL PEPIRLSDAP IQVFANWLLK EVQPSNPAS
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