| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0643 |
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| Symbol | hisD |
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| ID | 7388688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 555483 |
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| End bp | 556781 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643650251 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_002548462 |
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| Protein GI | 222147505 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGTTT GGCTTGAGCA GGCATCGGAT GATTTTGAGG CGCGGTTTTC CGCATTTCTC
ACCACCAAGC GGGAAGTGTC CGAGGATGTA AACGCAGTCG TCAGAACCAT TATCGACGAT
GTGCGGGCGC GCGGCGATGC CGCCTTGGCG GAGTATTCGC ATCGGTTCGA TGGGCTGGAT
TTCACAGTGA CGCCCATGCG CGTCACCGAA GCTGAAATCG ATGCGGCCTT TGCCGAGGTC
TCGCCTGAGC TGATCGATGC GTTGCACCTT GCCGCAGAGC GCATTGAGCG CCACCACGCG
CGCCAGATGC CCAAGGACGA TATCTACGAA GACGCCATCG GCGTCGGCCT CGGCTCCCGC
TGGACCGCCA TCGATGCGGT TGGTCTCTAT GTGCCGGGCG GCACGGCAAG CTATCCCAGT
TCCGTGCTGA TGAATGCCGT TCCGGCCAGG GTTGCTGGGG TGCCGCGCGT CGTCATGGTC
GTGCCGGCCT CCGGCGGTGC CATCAATCCC ACGGTGCTGG CTGCGGCAAA AATTGCTGGC
GTGACGGAAA TCTACCGGAT CGGTGGCGCT CAGGCTGTCG CCGCACTCGC TTACGGCACG
CAAACCATCG AACCGGTCGC CAAGATCGTC GGCCCCGGCA ATGCCTATGT GGCCGCTGCC
AAGCGCCATG TGTTCGGCAC TGTTGGCATC GATATGATCG CTGGCCCTTC GGAAGTGCTT
GTTATCGCCG ACAAGGATAA TGACCCAGAC TGGATTGCCG CCGATCTGCT GGCGCAGGCG
GAACACGACC GGGGCGCTCA ATCGATCCTG ATCACTGACA GTCCGGACTT TGCCAAGGCC
GTTGAGGCTG CCGTCGAGCG GCAATTGAAA ACATTGAGCC GCAGCGAAAC TGCCAGCGCC
AGCTGGCAGG ATTTTGGCGC GCTGGTCATT GTCCCGAACC TTACCGCTGC CGTGCCGCTT
GCCAACCGCA TTGCCGCCGA GCATCTGGAA CTCGCCGTCG CCGATCCCGA TGCGCTGATG
GCGGGCATTC GCAATGCTGG CGCGATCTTC ATCGGTCGCC ATACGCCGGA AGTGATCGGC
GACTATGTTG GCGGCTCCAA CCACGTCCTG CCCACGGCCC GTTCGGCGCG GTTTTCGTCA
GGCCTGTCGG TGCTGGATTT CGTCAAGCGC ACATCGATAT TACGGCTCGG CCCGCAACAG
CTTAGGCAAT TGGCGCCGGC AGCAATTGCT TTGGCCAAGA GCGAGGGGCT GGATGCCCAT
GCACGATCCG TCGCCATCCG ACTCAATCTT GAGGAATAG
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| Protein sequence | MAVWLEQASD DFEARFSAFL TTKREVSEDV NAVVRTIIDD VRARGDAALA EYSHRFDGLD
FTVTPMRVTE AEIDAAFAEV SPELIDALHL AAERIERHHA RQMPKDDIYE DAIGVGLGSR
WTAIDAVGLY VPGGTASYPS SVLMNAVPAR VAGVPRVVMV VPASGGAINP TVLAAAKIAG
VTEIYRIGGA QAVAALAYGT QTIEPVAKIV GPGNAYVAAA KRHVFGTVGI DMIAGPSEVL
VIADKDNDPD WIAADLLAQA EHDRGAQSIL ITDSPDFAKA VEAAVERQLK TLSRSETASA
SWQDFGALVI VPNLTAAVPL ANRIAAEHLE LAVADPDALM AGIRNAGAIF IGRHTPEVIG
DYVGGSNHVL PTARSARFSS GLSVLDFVKR TSILRLGPQQ LRQLAPAAIA LAKSEGLDAH
ARSVAIRLNL EE
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