| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0641 |
|---|
| Symbol | |
|---|
| ID | 7388686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 554492 |
|---|
| End bp | 554995 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643650249 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548460 |
|---|
| Protein GI | 222147503 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC CGACCAAAGA TCCCACCGGC ATCGGCGCCG ATCACAGCCA AGAGAGGGCC
ATACCCCACT CCGTGCTGTT CCTTTGCGGT ATGAATGCCG TGCGCTCGCC CATGGCCGAG
GCCCTTGCCA AGAGGTTGCT GCCGTCAGGT GTCTATGTTG CCTCGGCGGG CGTGCGGCAT
GGCGAGCGCG ATCCTTTCGT TGATGTGGTG CTGGATGAAA TCGGGCTTTC GCTGGGCAAG
CGTCAGCCGC AGACCCTGGA CGAGCTGGAG GACGACTTTT TTGACCTCGT TGTCACTCTG
GCTCCCGAAG CGCATCATGC CGCCCTGGAA CTGACTCGCT CCTCTTCCGT TGAGGTGGTG
TATTGGCCGA TGCATGACCC AACCATCGAG GCCGATACCC GCGACCAGCA ACTGGCCGCC
TATCGCGAGG TGCGAGACCG GCTGGCGGTG CTGATCGAGC AGCGCTTCAA ACGGCCTGGA
ACAAGCCCGC TTGGCGGCGT TTGA
|
|---|
| Protein sequence | MSEPTKDPTG IGADHSQERA IPHSVLFLCG MNAVRSPMAE ALAKRLLPSG VYVASAGVRH
GERDPFVDVV LDEIGLSLGK RQPQTLDELE DDFFDLVVTL APEAHHAALE LTRSSSVEVV
YWPMHDPTIE ADTRDQQLAA YREVRDRLAV LIEQRFKRPG TSPLGGV
|
|---|
| |