| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0633 |
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| Symbol | |
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| ID | 7388682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 550669 |
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| End bp | 551541 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650244 |
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| Product | epimerase protein |
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| Protein accession | YP_002548456 |
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| Protein GI | 222147499 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGA CTATTCTGTT GACGGGAGCG ACGGGCTTTG TTGGGAGACA GATCCACCGT
GCTCTGCTGG ACGCCGGTCA TAGCGTGGTG GCTGTCGTCC GGCGTTCTAC CGCAAGCATT
CTTGCGGTAG AACGCCGTGC CGCGAGAGTG ATCGAGACGG AGGATGTTTT TGCACAATCG
GCCGATTGGT GGGCGGCCCA GTGCCAGGGC TGCGACGCGG TCATCCACGC CGCCTGGTAT
GTGGAGGCGG GGAAATACCT GGATTCGCCG CTGAATTTTC ACTGCGTTAC CGGCAGTTTG
GCCCTGGCGC AAGGGGCTGC ACGCGCTGGC ATTTCCCATT TCATCGGCCT TGGCACCTGT
GTCGAATATC GCTTGCCGTC GAACCACTTG ACCGTGAATT CACCCCTTGA GCCGAAGACG
CTTTATGCCG CTGCCAAGCT TTCCACCTAC CAGATGTTGG ACCGGTATTT TGCAGGCCTT
GGCCTGGGGT TTTCCTGGTG CCGGATCTTT TATCTCTATG GGGAAGGCGA ACATCCGGCC
CGTCTTGTGC CTTATCTGAG GCAACAACTT TCGCAAGGGC TCGCTGCCAA GCTTTCCAAA
GGCACGCAAT GGCGCGATTT TCTGGATGTG AAAGAGGCCG GAAAAATGAT TGCTGGCGTT
GTCGATACCG GACAGACCGG CGCGGTCAAT ATCTGCTCCG GCAAGGCGGT CACCATTCGG
GCGCTGGCCG AACGCATTGC CGATGACTAT GGCCGCCGCG ACCTGCTGGA ATTCGGCACG
GCAGAGATCC ATCCTACCGA TCCCCTGGCG GTGGTCGGCG TGTGCAATGT TGCGGCGTTC
AAGCCTGCCT CAGGAGTAAT GGCTGCCGGT TGA
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| Protein sequence | MGKTILLTGA TGFVGRQIHR ALLDAGHSVV AVVRRSTASI LAVERRAARV IETEDVFAQS
ADWWAAQCQG CDAVIHAAWY VEAGKYLDSP LNFHCVTGSL ALAQGAARAG ISHFIGLGTC
VEYRLPSNHL TVNSPLEPKT LYAAAKLSTY QMLDRYFAGL GLGFSWCRIF YLYGEGEHPA
RLVPYLRQQL SQGLAAKLSK GTQWRDFLDV KEAGKMIAGV VDTGQTGAVN ICSGKAVTIR
ALAERIADDY GRRDLLEFGT AEIHPTDPLA VVGVCNVAAF KPASGVMAAG
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