| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0624 |
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| Symbol | aspB |
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| ID | 7388675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 542472 |
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| End bp | 543659 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643650237 |
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| Product | aspartate aminotransferase |
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| Protein accession | YP_002548449 |
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| Protein GI | 222147492 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.68726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGC CTGCCGGTCC ATCCCTGATT TCCAGCCTTA GCCACCGTGC CACGTCCGCG
CCCGAAAGCG GTATTGTCGA GATTATCAAC TATGCGCGTG GGCGCGATAA TCTCCTACCG
CTCTGGGCCG GGGAAGGCGA CCTGCCGAGC CCGGATTTCA TCAATCGGGC CGCAAGCGAC
GCGCTTCTGG GTGGCGAGAC ATTCTATACC TGGCAACGTG GCATTCCCGA ACTGCGTCAG
GCGCTTTCTG ATTACTACCG GCGGCATTTC GCCGTCAGCC TGCCAAGCGA GCATTTCTAT
GTAACCGGCT CCGGCATGCA GGCCATCCAG CTTGCCGTGC AGGCGATGAC CGGGCCGGGC
GACGAGATGA TCTACCTTTC CCCCTGCTGG CCCAATATCG TCGCCGCCAT CGAAATCAGT
GGCGCAAAGG CTGTCGGTGT GGAAATCGGC TATAATCATG GTGCCTGGCA GCTGGATCTC
GGGCAGATCG AAAAGGCGAT TACGCCCAAA ACCAAGGCGC TGTTCATCAA CACGCCGTCC
AACCCGACCG GCTGGACGGC CAGCCTCGAT GATCTGCGCG CCATTCTGGC GCTGGCCCGC
AAGCATGGTC TTTGGATTCT GGCGGATGAA ATTTACTCGC TTTACTATTT TGCTGGTCCC
TCCCGTGCTC CGTCCTTTCT GGATGTGATG GAAGAGGGCG ACCGGGTGAT GTTTGGCAAT
TCCTTTTCCA AGAATTGGTC GATGACCGGT TGGCGGGTCG GCTGGCTGGT GGCGCCACCG
GAAATCGGTC AGGTGCTGGA AAACCTCATT CAATATTCCA CCTCTGGCGT GGCGCAGTTC
ATGCAGCGCG GTGCGGTGGC GGCCTTGGAC CACGGCGATC AATTCGTCGC CGAAAACATC
CAGCGGGCGA GTACCTCGCG CGATATCCTG CTGGATGCGC TGATTGCCAC CAACCGGGTC
CGTTCCGTTA AGCCGGATGG CGCGCTTTAT GCTTTCATGG AAATCGATGG CGTGACTGAC
AGCCGGGCGG CGGCCATGGA TATCGTTGAT AAAACCGGCG TGGCGCTGGC GCCCGGGTCG
GCGTTCGGGG CAGGTGGCAG CTCGTTCCTG CGCGCCTGTT TCCTGCGCGA TCCACGCCAG
ATCGAGGATG CGGCTGCACG GTTGAGCGAT TACATTGCCC GGCTTTGA
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| Protein sequence | MSLPAGPSLI SSLSHRATSA PESGIVEIIN YARGRDNLLP LWAGEGDLPS PDFINRAASD
ALLGGETFYT WQRGIPELRQ ALSDYYRRHF AVSLPSEHFY VTGSGMQAIQ LAVQAMTGPG
DEMIYLSPCW PNIVAAIEIS GAKAVGVEIG YNHGAWQLDL GQIEKAITPK TKALFINTPS
NPTGWTASLD DLRAILALAR KHGLWILADE IYSLYYFAGP SRAPSFLDVM EEGDRVMFGN
SFSKNWSMTG WRVGWLVAPP EIGQVLENLI QYSTSGVAQF MQRGAVAALD HGDQFVAENI
QRASTSRDIL LDALIATNRV RSVKPDGALY AFMEIDGVTD SRAAAMDIVD KTGVALAPGS
AFGAGGSSFL RACFLRDPRQ IEDAAARLSD YIARL
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