| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0614 |
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| Symbol | |
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| ID | 7389001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 530611 |
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| End bp | 531381 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650229 |
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| Product | ABC transporter substrate binding protein (amino acid) |
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| Protein accession | YP_002548441 |
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| Protein GI | 222147484 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTTT TCCGCACCGC TCTGGTCACA GCCCTGCTGT TGACGTCCTC TCTTGCCCAT
GCCGAGGATG GCACACTGGC AACCATCAAG CAGGCGGGCG TGATCCGCAT CGGCACGACA
GGGGATTACA AACCCTTCAG CTACAAGGGT GGCGATGGCG AATTGGTCGG AGCCGATATT
TCCATGGGCA AGGCGCTGGC CACCGATCTC GGCGTCAAGC CGGAGTTTGT GATGACCTCC
TGGAAAACCA TGCTGGAGGA TTTCAAGGCC GGAAAGTTCG ACATGGTTCT GGGCGGCATT
ACCGTCAATC CGGCCCGGGC CGAGGTCGGT GATTTCTCGC TTTCGAATGT CAAGGATGGC
AAACGGCCAA TCGTCCGCTG CGAGGACAAG GACAGGCTGG TGACGCTGGA GGCGATCGAT
CAGCCCTCGG TGCGCGTTAT CGTCAATCCC GGCGGCACCA ACGACAAATT TGCCCATGAG
CATTTCACCA AGGCGCCTAT CGAGGTTTTT CCCGATAATA AGGTGATTTT CGATCAGATT
GCCGCCAACA AGGCGGATGT AATGGTGACC GACGGCGTGG AAGTGGACCT GCAATCCAAG
CTGCATCCCG GCGTGCTTTG CCCTTCTGCC GTCAAGGAAC CCTTCACCCA TTTTGAAAAC
GCCTATCTGC TGCGCAAGGA CCCGGCCTTC AAGGCTGCGG TGGACGGTTT CATGGCAAAG
GCGCTGGAAA ACGGTGACTG GAAGGCCAAG CTGGACGCTG CGATGCAGTA A
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| Protein sequence | MTFFRTALVT ALLLTSSLAH AEDGTLATIK QAGVIRIGTT GDYKPFSYKG GDGELVGADI
SMGKALATDL GVKPEFVMTS WKTMLEDFKA GKFDMVLGGI TVNPARAEVG DFSLSNVKDG
KRPIVRCEDK DRLVTLEAID QPSVRVIVNP GGTNDKFAHE HFTKAPIEVF PDNKVIFDQI
AANKADVMVT DGVEVDLQSK LHPGVLCPSA VKEPFTHFEN AYLLRKDPAF KAAVDGFMAK
ALENGDWKAK LDAAMQ
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