| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0608 |
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| Symbol | |
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| ID | 7388997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 524760 |
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| End bp | 526037 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643650225 |
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| Product | permease component protein |
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| Protein accession | YP_002548437 |
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| Protein GI | 222147480 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTT TCATCCTTGC CGATCTGCGC CGCCTCTGGG CCGGTGCGCT GGTTGTCTGC
CTGCTGGTGG CGCTCTCGAC CGCGCTTGGC GTGACGGTGA CCTTGCAGGA ACGGGCCTTG
CGGCTGGGCA GTGCCCGGGC TGCGGATAAA TTTGATCTGG TGATCGGTGC AGCCGGGTCG
GAAACCCAGT TGGTCCTGTC CTCAGTGTTT TTGCAGCCTT CGCCCTTGCC GCTGGTGCCG
GGTGGGGTTC TGGCGACATT GCAGGCCGAT CCCCGTGTGG AGTGGGCAGC ACCTGTGGCG
TTTGGCGATA GTTTTTCCGG CTATCCGATT GTCGGTACGA CGACACGGCT GATTACTGCG
ACCACGCCGG GCTTTGCCGA GGGGCAGCTG TTTCAGCGCG AAGGCGAGGC GGTGGTCGGT
GCCGATGTGA AACTGAAGAC CGGCGATACG GTCAAGCCGA TGCATGGCAC GGCTGCCGAA
GGCGGCCATA CCCATGGCGA ACTGGCCTAT CATGTCGTTG GCAGGCTGAA AGCCACCGGC
ACGGCCTGGG ATCGCGCTAT CCTCGTTCCG GTTCAGGCCG TCTGGCATAT TCACGGTCTC
GGTGAAGAGC ATGAGGATCA CGATGCGGAG GAGGCAGCAG CGGACAAGGG CGAGGCCGGT
CACGATGAGG ATCATGACGA GCACGATCAT CATGGTCATA TCGACCCCGA TGCAGCTCTC
TTAGAGCAGT TCTCAGCCGC AGACCCTGGC GTACCGGCCA TTCTGGTTAA GCCGAAAACC
ATTGCCGCCG CCTATAAGCT GCGGCAGGAC TATCGCAACG ACCGGACACT CGGCGTTTTC
CCTGGTGAGG TTCTGACCAG ACTTTACGCG ACGCTGGGTG ATGCGAAACT GGTTTTGTCC
TTCGTGGCAA TCGGCGCGCA GGCGCTGGTG GCGGGCGCGC TATTGCTGGT GACGGTCGTT
CATATCGGCC AACGCCGCAA GCAGATTGGC GCCCTCAGAG CCTTTGGCGC CCCCAGATCT
TCGGTCTTCC TGATCGTCTG GTGCGAGCTT TTCAGCCTGT TCCTGGGCGG TATCGGGTTT
GGTGTGGCTA TGGGATATGC GGCGGCAAGG GTCATTTCGC AAACCGTCAA GACCAGCAAT
GGCTTTAACC TGCCGGTGGA ATTCGCAAGC CAGGATGGCT GGCAGATTTG TGCCATGCTG
GTCTTTGCCG GGCTGCTTTC GGCGCTGCCG GCTTGGCTTG CCTATCGCCA ATCGCCAGTG
GCTGCGCTGC GCTCCTGA
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| Protein sequence | MIRFILADLR RLWAGALVVC LLVALSTALG VTVTLQERAL RLGSARAADK FDLVIGAAGS
ETQLVLSSVF LQPSPLPLVP GGVLATLQAD PRVEWAAPVA FGDSFSGYPI VGTTTRLITA
TTPGFAEGQL FQREGEAVVG ADVKLKTGDT VKPMHGTAAE GGHTHGELAY HVVGRLKATG
TAWDRAILVP VQAVWHIHGL GEEHEDHDAE EAAADKGEAG HDEDHDEHDH HGHIDPDAAL
LEQFSAADPG VPAILVKPKT IAAAYKLRQD YRNDRTLGVF PGEVLTRLYA TLGDAKLVLS
FVAIGAQALV AGALLLVTVV HIGQRRKQIG ALRAFGAPRS SVFLIVWCEL FSLFLGGIGF
GVAMGYAAAR VISQTVKTSN GFNLPVEFAS QDGWQICAML VFAGLLSALP AWLAYRQSPV
AALRS
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