Gene Avi_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0583 
Symbol 
ID7388977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp500186 
End bp500860 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content59% 
IMG OID643650205 
Productbacteriophage repressor protein 
Protein accessionYP_002548417 
Protein GI222147460 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCAC ACGAGACAAT CTGGAATGCG ATTGACCGGC TTGCCGAGCA GTATCATCTG 
ACGCCGTCCG GGCTGGCCCG AAAGGCCGGC CTTGATCCAA CCTCGTTCAA CAAGTCCAAG 
CGGGTCGGGC CGGATGGACG CATGCGCTGG CCATCGACCG AATCCATCGC TAAGGTGCTG 
GAAGCGACAG GTGCGCGGAT CGATCAATTC GTCACGCTGA TCAGCAATGA CAACCATCAG 
GTCAATGCCG TTCACGAGAC ATTGCCGGAT GGCAATTTTC CGCCGCAGAT CGGCACTATA 
CCGCTGCTTG GCTTGGCCCA GGCGGGCTCG GGCGGTTTTT TTGACGATGG CGGTTTTCCA 
GCCGGACAAG GCTGGGATCT GGTGGATTTA CCGACCTCCG CCAAGCCAGG CGTCTATGCC 
CTGGAAATTC AGGGCGACAG TATGAAGCCA CTTTATCGCG ATGGCGATAT TCTGATCGTT 
GAGCCAGGTG CGCCTGTGCG CCGGGGCGAC CGGGTCGTCG TCAAAACCTG CGATGGCGAG 
GTCATGGCCA AGGTACTGGG CCGCCAGACG GCGCGGACCG TTGATCTCAT TTCGATCAAT 
CCCGACCATC CGAACCGGGT ATTGGATATG CAGGACGTCG AATGGATCGC CCGAATCATC 
TGGGTCAGCC AGTAG
 
Protein sequence
MLSHETIWNA IDRLAEQYHL TPSGLARKAG LDPTSFNKSK RVGPDGRMRW PSTESIAKVL 
EATGARIDQF VTLISNDNHQ VNAVHETLPD GNFPPQIGTI PLLGLAQAGS GGFFDDGGFP 
AGQGWDLVDL PTSAKPGVYA LEIQGDSMKP LYRDGDILIV EPGAPVRRGD RVVVKTCDGE 
VMAKVLGRQT ARTVDLISIN PDHPNRVLDM QDVEWIARII WVSQ